Ames Test (Molecular Biology)

The Salmonella/mammalian microsome test for mutagens was originally developed in the laboratory of Bruce Ames (1) and has become sufficiently used and well-recognized to be familiarly described by his name. The assay utilizes several specially constructed strains of Salmonella typhimurium that normally require histidine for growth and can be reverted to prototrophy by a wide range of different mutagens. The assay requires that test chemicals and bacteria be plated onto a minimal agar petri dish, incorporating trace amounts of histidine and biotin, which are required for growth, to allow all the bacteria to grow through a small number of generations. In the absence of mutagen, a small number of colonies will grow on these plates, whereas mutagenic chemicals may increase this number very considerably. Mutations are scored as the number of revertant colonies per dish, usually as a function of applied dose. The test protocol incorporates homogenates of (usually) rat liver directly into the petri dish, thereby permitting mammalian metabolism of many compounds that require activation before they will interact with cellular DNA.

The DNA sequence around the original mutation has been determined in those strains most commonly used for mutagenicity testing (Table 1). The bacteria have been made more sensitive to mutagens by the introduction of several additional characteristics. Many of the strains carry a deletion in the uvrB gene and are defective in the ability for DNA repair. The bacterial cell wall has increased permeability to bulky chemicals because of the rfa mutation, and certain introduced plasmids may increase the sensitivity of the bacteria to mutation by some types of chemicals. The Ames test was originally developed as a screen for chemical carcinogens (1), but this has only proved appropriate to certain chemical classes (eg, Ref. 2). Nevertheless, because of the enormous number of chemicals tested in this assay, it must still occupy a premier position in testing for mutagenic properties of chemicals.


Table 1. Genotype and Reversion Characteristics of Some Salmonella typhimurium Strains Commonly Used for Mutagenicity Testing

                                             Additional Mutations

Histidine Strain

Mutation Number Permeability

Repair R Factor

Nature of

Mutation

hisC3076 TA1537

rfa

DuvrB -

WT sequence unknown.

Mutant thought to be +1 near CCC

Frameshifts

hisD3052 TA1538

rfa

DuvrB -

WT:GAC-

ACC-GCC-

CGG-CAGH

Frameshifts

TA98

pKM101

Mutant:GAC-

ACC-GCC-

GGC-AGGH

HisD6610 TA97

rfa

DuvrB PKM101

WT:GTC-ACC-CCT-

GAA-GAG-

*

A TC-GCC Mutant:GTC-

Frameshifts

tmp5-1

hisG46 TA1535

rfa

DuvrB -

tmp5-2

Some base-pair

substitution events

TA100

pKM101

tmp5-3

Extragenic suppressors

HisG428 TA102

rfa

PAQ1

tmp5-4

Transitions

tmp5-5

and

transversions

TA104

tmp5-6

Extragenic suppressors

Small

deletions (3, -6)

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