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tions of 15n-metabolic labeling for automated peptide identication in Arabidopsis
thaliana. Proteomics 7 (2007) 1279{1292.
[60] Tang, X., Munske, G.R., Siems, W.F., Bruce, J.E.: Mass spectrometry identiable
cross-linking strategy for studying protein{protein interactions. Anal Chem. 77 (2005)
311{318.
[61] Anderson, G.A., Tolic, N., Tang, X., Zheng, C., Bruce, J.E.: Informatics strategies
for large-scale novel cross-linking analysis. J. Proteome Res. 6 (2007) 3412{3421.
[62] Morsy, M., Gouthu, S., Orchard, S., Thorneycroft, D., Harper, J.F., Mittler, R.,
Cushman, J.C.: Charting plant interactomes: possibilities and challenges. Trends in
Plant Science 13 (2008) 1360{1385.
[63] Shi, T.L., Li, Y.X., Cai, Y.D., Chou, K.C.: Computational methods for protein-
protein interaction and their application. Curr. Protein Pept. Sci. 6 (2005) 443{449.
[64] Sun, J., Sun, Y., Ding, G., Liu, Q., Wang, C., He, Y., Shi, T., Li, Y., Zhao, Z.:
Inpreppi: an integrated evaluation method based on genomic context for predicting
protein-protein interactions in prokaryotic genomes. BMC Bioinformatics 26 (2007)
414.
[65] Tatusov, R.L., Fedorova, N.D., Jackson, J.D., Jacobs, A.R., Kiryutin, B., Koonin,
E.V., Krylov, D.M., Mazumder, R., Mekhedov, S.L., Nikolskaya, A.N., Rao, B.S.,
Smirnov, S., Sverdlov, A.V., Vasudevan, S., Wolf, Y.I., Yin, J.J., Natale, D.A.: The
cog database: an updated version includes eukaryotes. BMC Bioinformatics 4 (2003)
41.
[66] Albert, R., Barabasi, A.L.: Statistical mechanics of complex networks. Rev. Mod.
Phys. 74 (2002) 47.
[67] Albert, R., Jeong, H., Barabasi, A.L.: Error and attack tolerance of complex net-
works. Nature 406 (2000) 378{382.
[68] Zhang, Y., Wolf-Yadlin, A., Ross, P.L., Pappin, D.J., Rush, J., Lauenburger, D.A.,
White, F.M.: Time-resolved mass spectrometry of tyrosine phosphorylation sites in
the epidermal growth factor receptor signaling network reveals dynamic modules.
Mol. Cell Proteomics 4 (2005) 1240{1250.
[69] Uetz, P., Giot, L., Cagney, G., Manseld, T.A., Judson, R.S., Knight, J.R., Lockshon,
D., Narayan, V., Srinivasan, M., Pochart, P., Qureshi-Emili, A., Li, Y., Godwin, B.,
Conover, D., Kalbeisch, T., Vijayadamodar, G., Yang, M., Johnston, M., Fields, S.,
Rothberg, J.M.: A comprehensive analysis of protein-protein interactions in Saccha-
romyces cerevisiae. Nature 403 (2000) 623{627.
[70] Wagner, A.: The yeast protein interaction network evolves rapidly and contains few
duplicate genes. Molecular Biology and Evolution 18 (2001) 1283{1292.
[71] Ito, T., Chiba, T., Ozawa, R., Yoshida, M., Hattori, M., Sakaki, Y.: A comprehensive
two-hybrid analysis to explore the yeast protein interactome. Proc. Natl. Acad. Sci.
USA 98 (2001) 4569{4574.
[72] Goh, K.I., Oh, E., Jeong, H., Kahng, B., Kim, D.: Classication of scale-free net-
works. Proc. Natl. Acad. Sci. USA 99 (2002) 12583{12588.
[73] Li, S., Armstrong, C.M., Bertin, N., Ge, H., Milstein, S., Boxem, M., Vidalain, P.O.,
Han, J.D.J., Chesneau, A., Hao, T., Goldberg, D.S., Li, N., Martinez, M., Rual, J.F.,
Lamesch, P., Xu, L., Tewari, M., Wong, S.L., Zhang, L.V., Berritz, G.F., Jacotot,
L., Vaglio, P., Reboul, J., Hirozane-Kishikawa, T., Li, Q., Gabel, H.W., Elewa, A.,
Baumgartner, B., Rose, D.J., Yu, H., Bosak, S., Sequerra, R., Fraser, A., Mange, S.E.,
Saxton, W.M., Strome, S., van den Heuvel, S., Piano, F., Vandenhaute, J., Sardet,
C., Gerstein, M., Doucette-Stamm, L., Gunsalus, K.C., Harper, J.W., Cusick, M.E.,
Roth, F.P., Hill, D.E., Vidal, M.: A map of the interactome network of the metazoan
C. elegans. Science 303 (2004) 540{543.
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