Biology Reference
In-Depth Information
Nostoc punctiforme
PCC 73102
Npun_R1070
Npun_F1381
Npun_R1496
Npun_R4851
Npun_R5250
Npun_F5505
Npun_F2453
742
700
734
736
738
748
467
30-50
21-41
25-45
22-42
35-55
25-45
22-42
430-450
431-451
431-451
457-477
442-462
429-449
649-669;
683-703
No
Yes
Yes
Yes
Yes
Yes
No
ALPDEGKS
SVPREGKS
SVGKEGKS
STPGEGRS
ALPGEGKT
AVPKEGKS
No
DAN
DGN
DAD
DAD
DAN
DAD
No
LVLID
FVIID
LVIFD
CVIID
LVLID
FVIID
No
2
0
1
5
0
0
No
Nostoc
sp. PCC
7120
all5222
all4432
alr3059
alr2856
alr2833
all0059
all0493
714
734
727
736
771
727
727
52-72
25-45
16-36
24-44
61-81
33-53
16-36
428-448
431-451
426-446
432-452
473-493
450-470
430-450
647-667
527-547
Yes
Yes
Yes
Yes
Yes
Yes
Yes
VMAGDGKS
SVPKEGKS
PLSGEGKS
CVMNEGKS
PLLDRGKS
ALPGEGRT
TSSQEGKT
DVN
DAD
DAD
DAD
DAN
DAN
ETD
LVIYD
FIIFD
LVIID
CVIID
LVIID
LVLID
LVILD
2
3
4
4
3
2
2
Cylindrospermop-
sis raciborskii
CS-505
CRC_01492
CRC_01573
CRC_03354
CRC_03451
746
741
776
724
41-61
31-51
53-73
24-44
449-469
443-463
434-454
434-454
Yes
Yes
Yes
Yes
SSPGEGKS
ALPDISKS
ALKGEGKS
ALPGEGKT
DGD
DAN
DTD
DGN
FVIID
LVLID
LVIYD
LVIID
7
2
7
0
*The prediction of transmembrane domains was performed using TOPCONS (
Bernsel, Viklund, Hennerdal, & Elofsson, 2009
).
†
The motifs in agreements with the canonical Walker A, DXD, and Walker B (
Cuthbertson et al., 2009
;
Morona et al., 2000
;
Soulat et al., 2007
;
Walker et al., 1982
)
are in bold and underlined.
‡
h: hydrophobic amino acid.
