Biology Reference
In-Depth Information
Table 7.3
Characteristics of the putative PCP proteins identified for cyanobacteria—cont'd
P- and
G-rich motif
(preceding and
overlapping
TM2)
Y-rich C
terminus
(tail from
Walker B)
Walker A
†
Walker B
†
Transmembrane domains*
Length
(no. aa)
Other
TMs
[A/G]
XXXXGK[S/T]
DxD
†
Organism
Locus tag
TM1
TM2
hhhhD
‡
Microcoleus vagina-
tus
FGP-2
MicvaDRAFT_4285
MicvaDRAFT_2066
MicvaDRAFT_3627
778
774
785
52-72
53-73
51-71
457-477
480-500
477-497
Yes
Yes
Yes
AVAGDGKS
CQVADGKS
ATVGEGKS
DAD
DAD
DAN
LVIYD
LVIYD
LVIYD
2
5
2
Nostocales
Nostoc azollae
0708 Aazo_4516
Aazo_4925
Aazo_3125
740
739
743
33-53
53-73
30-50
448-468
430-450
448-468
Yes
Yes
Yes
ALPGEGKT
TMPGDGKT
ALPDDGKS
DAN
DGD
DAN
LVLID
LVIYD
LVLID
1
4
2
Anabaena variabilis
ATCC 29413
Ava_4846
Ava_1386
Ava_1116
Ava_1045
Ava_0852 Ava_2908
742
734
741
736
727
727
21-41
25-45
31-51
24-44
16-36
16-36
434-454
431-451
443-463
432-452
426-446
430-450
647-667
527-547
Yes
Yes
Yes
Yes
Yes
Yes
ALPREGKS
SVPKEGKS
PLLDRGKS
CVMNEGKS
PLAGEGKS
TSSQEGKT
DGD
DAD
DAN
DAD
DAD
ETD
FVIID
FIIFD
LVIID
YVIID
LVIID
LVILD
1
3
3
4
4
2
Nodularia spumi-
gena
CCY
9414
N9414_07903
N9414_00965
N9414_07219
N9414_00005
N9414_07896
N9414_23213
304
747
732
597
230
713
50-70
32-525
29-49
2-22
17-37
445-46
459-479
410-430
429-449
No
Yes
Yes
Yes
No
Yes
No
ALRDESKS
ALSREGKT
CLPGEGKS
VMAGEGKS
TSSQEGKT
No
DAN
DAN
DAD
DGD
ETD
No
LVLID
LVIID
No
LVIYD
LVILD
No
2
0
No
4
1
