Genome Engineering by Transgene- Instructed Gene Conversion in C. elegans - Caenorhabditis Elegans: Molecular Genetics and Development - page 87

Frokjaer-Jensen, C., Davis, M. W., Hollopeter, G., Taylor, J., Harris, T. W., Nix, P., Lofgren, R., Prestgard-
Duke, M., Bastiani, M., Moerman, D. G., and Jorgensen, E. M. (2010). Targeted gene deletions in
C. elegans using transposon excision. Nature Methods 7 , 451-453.
Gendrel, M., Rapti, G., Richmond, J. E., and Bessereau, J. L. (2009). A secreted complement-control-
related protein ensures acetylcholine receptor clustering. Nature 461 , 992-996.
Gloor, G. B., Nassif, N. A., Johnson-Schlitz, D. M., Preston, C. R., and Engels, W. R. (1991). Targeted
gene replacement in Drosophila via P element-induced gap repair. Science 253 , 1110-1117.
Green, R. A., Audhya, A., Pozniakovsky, A., Dammermann, A., Pemble, H., Monen, J., Portier, N.,
Hyman, A., Desai, A., and Oegema, K. (2008). Expression and imaging of fluorescent proteins in
the C. elegans gonad and early embryo. Methods Cell Biol. 85 , 179-218.
Hartl, D. (2001). Discovery of the transposable element mariner. Genetics 157 , 471-476.
Hobert, O. (2002). PCR fusion-based approach to create reporter gene constructs for expression analysis
in transgenic C. elegans. Biotechniques 32 , 728-730.
Jacobson, J. W., and Hartl, D. L. (1985). Coupled instability of two X-linked genes in Drosophila
mauritiana: Germinal and somatic mutability. Genetics 111 , 57-65.
Jacobson, J. W., Medhora, M. M., and Hartl, D. L. (1986). Molecular structure of a somatically unstable
transposable element in Drosophila. Proc. Natl. Acad. Sci. U.S.A. 83 , 8684-8688.
Jantsch, V., Pasierbek, P., Mueller, M. M., Schweizer, D., Jantsch, M., and Loidl, J. (2004). Targeted gene
knockout reveals a role in meiotic recombination for ZHP-3, a Zip3-related protein in Caenorhabditis
elegans. Mol. Cell Biol. 24 , 7998-8006.
Kelly, W. G., Xu, S., Montgomery, M. K., and Fire, A. (1997). Distinct requirements for somatic and
germline expression of a generally expressed Caernorhabditis elegans gene. Genetics 146 , 227-238.
Ketting, R. F., Haverkamp, T. H., van Luenen, H. G., and Plasterk, R. H. (1999). Mut-7 of C. elegans,
required for transposon silencing and RNA interference, is a homolog of Werner syndrome helicase and
RNaseD. Cell 99 , 133-141.
Ketting, R. F., and Plasterk, R. H. (2000). A genetic link between co-suppression and RNA interference in
C. elegans. Nature 404 , 296-298.
Lehrbach, N. J., Armisen, J., Lightfoot, H. L., Murfitt, K. J., Bugaut, A., Balasubramanian, S., and Miska,
E. A. (2009). LIN-28 and the poly(U) polymerase PUP-2 regulate let-7 microRNA processing in
Caenorhabditis elegans. Nat. Struct. Mol. Biol. 16 , 1016-1020.
Mello, C., and Fire, A. (1995). DNA transformation. Methods Cell Biol. 48 , 451-482.
Mello, C. C., Kramer, J. M., Stinchcomb, D., and Ambros, V. (1991). Efficient gene transfer in C. elegans:
Extrachromosomal maintenance and integration of transforming sequences. EMBO J. 10 , 3959-3970.
Merritt, C., Rasoloson, D., Ko, D., and Seydoux, G. (2008). 3 0 UTRs are the primary regulators of gene
expression in the C. elegans germline. Curr. Biol. 18 , 1476-1482.
Paabo, S., Irwin, D. M., and Wilson, A. C. (1990). DNA damage promotes jumping between templates
during enzymatic amplification. J. Biol. Chem. 265 , 4718-4721.
Pagano, J. M., Farley, B. M., Essien, K. I., and Ryder, S. P. (2009). RNA recognition by the embryonic cell
fate determinant and germline totipotency factor MEX-3.

Proc. Natl. Acad. Sci. U.S.A. 106 ,

20252-20257.
Plasterk, R. H. (1991). The origin of footprints of the Tc1 transposon of Caenorhabditis elegans. EMBO J.
10 , 1919-1925.
Plasterk, R. H., and Groenen, J. T. (1992). Targeted alterations of the Caenorhabditis elegans genome by
transgene instructed DNA double strand break repair following Tc1 excision. EMBO J. 11 , 287-290.
Praitis, V., Casey, E., Collar, D., and Austin, J. (2001). Creation of low-copy integrated transgenic lines in
Caenorhabditis elegans. Genetics 157 , 1217-1226.
Praitis, V., Ciccone, E., and Austin, J. (2005). SMA-1 spectrin has essential roles in epithelial cell sheet
morphogenesis in C. elegans. Dev. Biol. 283 , 157-170.
Robert, V., and Bessereau, J. L. (2007). Targeted engineering of the Caenorhabditis elegans genome
following Mos1-triggered chromosomal breaks. EMBO J. 26 , 170-183.
Robert, V. J., Davis, M. W., Jorgensen, E. M., and Bessereau, J. L. (2008). Gene conversion and end-
joining-repair double-strand breaks in the Caenorhabditis elegans germline. Genetics 180 , 673-679.