Geography Reference
In-Depth Information
Software
TAS (Nelson and Ladiges 1991b), which implements assumptions
0 and 1. The matrix obtained may be analyzed with any parsimony or com-
patibility algorithm.
Empirical Applications
de Meyer (1996), Ladiges et al. (1992), Morrone
(1993b), Morrone and Carpenter (1994), Morrone et al. (1994, 1997), van
Soest and Hajdu (1997), and van Veller et al. (2000).
The twenty-three species of the plant genus
Eucalyptus
known as “blue ash” con-
stitute a clade distributed in southeastern Australia. Ladiges et al. (1992) under-
took their cladistic analysis and based on the cladogram obtained presented a re-
solved area cladogram using the three area statement approach.
Ladiges et al. (1992) obtained the three area statements under assumptions 0,
1, and 2 and used Hennig86 (Farris 1988) for the parsimony analysis of the data
matrices. Additionally, they performed a BPA. The authors represented the distri-
butional areas of the species analyzed on maps, and on the basis of their coin-
cidence they identified twelve areas of endemism (
fig. 5.14a
). After replacing the
terminal species in the consensus cladogram with these areas of endemism, they
found some areas repeated across major clades, which were taken as evidence
of geographic paralogy. They concluded that three orthologous clades were ap-
propriate units for the analysis:
E. stenostoma-E. haemostoma, E. stellulata,
and
E. fraxinoides
groups. The
E. stenostoma-E. haemostoma
group (
fig. 5.14b
)
, un-
der assumption 1 generated 160 three area statements, which produced twelve
equally parsimonious cladograms (consensus cladogram in
fig. 5.14c
). Adding 111
three area statements for widespread taxa (assumption 0) resulted in a single
most parsimonious cladogram (
fig. 5.14d
)
. BPA resulted in seven cladograms
(consensus cladogram in
fig. 5.14e
). Resolution by hand of assumption 2, accept-
taxon-area cladograms of the
E. stellulata
and
E. fraxinoides
groups (
figs. 5.14g
cladogram, whereas the latter suggests that G is related to E
1
. Adding them to the
cladogram in
fig. 5.14d
gave a resolved area cladogram (
fig. 5.14i
) for the “blue
ash” clade, where E
2
had two alternative positions, and areas F and A were not
considered.
On the basis of the area cladogram obtained, Ladiges et al. (1992) suggested
a historical sequence in which area H, the southern New South Wales (NSW) es-
carpment, differentiated first from the remaining areas in southeastern Australia,
although differentiation of Mount Buffalo, Victoria (E
2
) may have been even earlier.