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be computed during the minimization. The generalized conjugate residual (GCR)
algorithm provides these diagnostics, at the cost of some additional complexity
compared with the conjugate gradient algorithm, but it performs reliably when the
approximate adjoint of the model is used.
The analysis produced by any data assimilation system is always limited by
the quality of the prior covariance models for the background, model forcings,
and observations. In Sect. 12.3 it was shown how the posterior error analysis of
Desroziers and Ivanov ( 2001 ) could be applied to calibrate these covariance models
in variational data assimilation systems using representer-based solvers. Application
of these methods has been applied to diagnose the observation error in NAVDAS-
AR, which utilizes many sources of atmospheric data, each with unique error
characteristics.
Acknowledgements Zaron was sponsored by the National Science Foundation (NSF), award
OCE-0623540, with additional support from the Naval Research Laboratory, award N00173-08-
2-C015. Authors Chua, Xu, Baker, and Rosmond gratefully acknowledge the support of their
sponsors, the Naval Research Laboratory, the Office of Naval Research, and the PMW-120, under
program elements, 0602435N and 0603207N, respectively. Computational resources for Zaron
were provided by the National Center for Atmospheric Research, which is sponsored by NSF.
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