Biology Reference
In-Depth Information
Oxidative Phosphorylation (46 genes)
Glycolysis (22 genes)
Protein Synthesis (157 genes)
14
20
4
12
15
3
Frequency
of
dissipative
structures
10
Frequency
of
dissipative
structures
Frequency of
dissipative
structures
8
10
2
6
5
4
1
2
S7
S5
S5
Grid
coordinate
(y)
Grid
coordinate
(y)
0
S4
0
0
Grid
coordinate
(y)
S1
1
2
3
4
5 6
7
8
S1
1
2
3
4
5
6
7
8
1
2 3
4
5
6 7
8
S1
Grid coordinate (x)
Grid coordinate (x)
Grid coordinate (x)
Oxidative Phosphorylation (46 genes)
Glycolysis (22 genes)
Protein Synthesis (157 genes)
20
30
10
25
15
8
Frequency
of
dissipative
structures
Frequency
of
dissipative
structures
Frequency
of
dissipative
structures
20
6
10
15
4
10
5
5
2
S4
S4
S4
Grid
coordinate
(y)
0
0
Grid
coordinate
(y)
Grid
coordinate
(y)
0
S1
S1
1
1
S1
2
2
1
3
3
2
4
4
5
3
5
4
5
Grid coordinate (x)
Grid coordinate (x)
Grid coordinate (x)
Oxidative Phosphorylation (46 genes)
Glycolysis (22 genes)
Protein Synthesis (157 genes)
25
8
100
80
20
6
Frequency
of
dissipative
structures
Frequency
of
dissipative
structures
Frequency
of
dissipative
structures
60
15
4
40
10
2
20
5
S2
S2
S2
Grid
coordinate
(y)
Grid
coordinate
(y)
0
Grid
coordinate
(y)
0
0
S1
S1
S1
1
1
1
2
2
2
Grid coordinate (x)
Grid coordinate (x)
Grid coordinate (x)
Fig. 12.10 Visualization of the patterns of distributions of RNA
dissipatons
or
ribons
with ViDaExpert with three different grid resolutions. Three functional groups
of transcripts were analyzed - the 46 transcripts involved in oxidative phosphorylation (
left column
), the 22 transcripts related to glycolysis (the
middle column
), and
the 157 transcripts associated with protein synthesis (
right column
). The grid resolution increases from 4 to 25 to 64 from the
bottom
to the
top
rows
