Environmental Engineering Reference
In-Depth Information
3 Enzymes Involved in Ammonia Turnover
In addition to the interconversion of NH 3 /NH 4 and biomass, ammonia is either
produced or consumed by various microbial enzymes (Figure 1 ; see Table 1 for a
comprehensive summary of some important enzymes and their properties). Accord-
ingly, ammonia is produced from dinitrogen (by nitrogenase; equation 5 ) or from
nitrite, nitric oxide or hydroxylamine. The latter three reactions (equations 13 , 14 ,
and 15 ) are catalyzed by members of the respiratory multiheme cytochrome c
(MCC) family (see Sections 4 and 5 for details; see Figure 2 in Section 4 for the
structure of heme c ), of which the cytochrome c nitrite reductase (NrfA) is the best
characterized enzyme.
¼ þ 340 mV 3 ½
ð
NO 2 þ 6e þ 8H þ ! NH 4 þ 2H 2 O 0 0
NO 2 = NH 4
13
Þ
5e þ
5H þ !
NO
þ
NH 3 þ
H 2 O
ð
14
Þ
2e þ
2H þ !
þ
NH 3 þ
ð
Þ
NH 2 OH
H 2 O
15
Conversely, ammonia is used as a substrate by the enzymes hydrazine synthase
(involved in the anammox process, equation 16 ) and ammonia monooxygenase,
which catalyzes the first step in the nitrification process, i.e., oxidation of ammonia
to nitrate via nitrite (equation 17 ).
3e þ
3H þ !
NO
þ
NH 3 þ
N 2 H 4 þ
H 2 O
ð
16
Þ
2e þ
2H þ !
NH 3 þ
O 2 þ
NH 2 OH
þ
H 2 O
ð
17
Þ
Hydrazine synthase has been recently purified from Candidatus Kuenenia
stuttgartiensis and characterized as an apparently anammox-specific heterotrimeric
complex (HzsABC) that contains two diheme cytochromes (gene products of
kuste2860 and kuste2861) [ 14 , 38 ]. In contrast, ammonia monooxygenase is a
membrane-integral copper-iron enzyme (see Chapter 6 in [ 7 ]).
4 Cytochrome c Nitrite Reductase as Paradigm
In principle, nitrite-reducing enzymes can be divided into two major classes.
The first class includes those enzymes reducing NO 2 to NO in the denitrification
pathway, the second class comprises those enzymes which reduce NO 2 directly to
NH 3 (Figure 1 ). In bacterial denitrification, two groups of dissimilatory nitrite
reductases are known, either a cytochrome cd 1 or a copper enzyme carrying a
type-1 and a type-2 Cu center. In nitrite-ammonifying bacteria there may exist two
different processes of nitrite reduction to ammonia, with different physiological
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