Biomedical Engineering Reference
In-Depth Information
TABLE 11.4. Nucleotide Sequence Variants in the Human ABCC2 Gene Identified in Patients with Dubin-Johnson Syndrome
Affected Region in
Nucleotide Change a
Consequence Predicted a
ABCC2 Protein b
Type of Variant
Location
First Reported (Ref.)
Nonsense
Exon 3
c.298 C
>
T c
p.R100X
Truncation in MSD0
270
Splicing
Exon 8
c.1031 + 4A > G
Complex splicing
Truncation in MSD1
271
Missense
Exon 9
c.1177 C > T
p.R393W
MSD1
272
In-frame indel
Exon 10
c.1256 1272indelCT c
p.E419 M424indelA
Disruption of MSD1
273
Missense
Exon 10
c.1321 C > A c
p.L441M
MSD1
274
Splicing
Exon 13
c.1815 + 2T > A
Exon 13 skipping
Disruption of MSD1
275
Splicing
Exon 15
c.1967 + 2T > C
p.K635X
Truncation in NBD1
276
Missense
Exon 16
c.2026 G > C c
p.G676R
NBD1
277
Missense
Exon 17
c.2125 T > C
p.W709R
NBD1
278
Missense
Exon 18
c.2302 C > T
p.R768W
NBD1
275
Splicing
Exon 18
c.2439 + 2T > C
Exon 18 skipping
Disruption of NBD1
20
c.2748 2838del c
Deletion
Exon 21
p.S916fsX
Truncation in MSD2
274
Nonsense
Exon 23
c.3196 C > T
p.R1066X
Truncation in MSD2
156
c.3399 3400del c
Deletion
Exon 24
p.Y1134CfsX
Truncation in MSD2
274
Missense
Exon 25
c.3449 G > A
p.R1150H
MSD2
279
Missense
Exon 25
c.3517 A > T
p.I1173F
MSD2
279
c.3615 3843del c
Deletion
Exon 26
p.W1206fsX
Truncation in MSD2
274
c.3825 C > G c
Nonsense
Exon 27
p.Y1275X
Truncation in MSD2
274
c.3928 C > T c
Nonsense
Exon 28
p.R1310X
Truncation in NBD2
282
c.4054 G > C c
Missense
Exon 29
p.E1352Q
NBD2
274
>
G c
Missense
Exon 29
c.4145 A
p.Q1382R
NBD2
20
Deletion
Exon 30
c.4175 4180del
p.R1392 M1393del
NBD2
19
Deletion
Exon 30
c.4292 4293del c
p.T1431RfsX
Truncation in NBD2
273
a As recommended by the Human Genome Variation Society (http://www.hgvs.org/mutnomen) and by ref. 263, nucleotide position + 1 is the A of the ATG of the
translation initiation codon in the ABCC2 cDNA sequence, “c.” describes a nucleotide change in relation to the ABCC2 cDNA sequence (NM 000392), “p.” describes
a change in relation to the ABCC2 protein sequence deduced (NP 000383), “X” denotes a premature stop codon, “fs” denotes a frame shift, and “indel” denotes
 
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