Biomedical Engineering Reference
In-Depth Information
TABLE 11.4. Nucleotide Sequence Variants in the Human
ABCC2
Gene Identified in Patients with Dubin-Johnson Syndrome
Affected Region in
Nucleotide Change
a
Consequence Predicted
a
ABCC2 Protein
b
Type of Variant
Location
First Reported (Ref.)
Nonsense
Exon 3
c.298 C
>
T
c
p.R100X
Truncation in MSD0
270
Splicing
Exon 8
c.1031
+
4A
>
G
Complex splicing
Truncation in MSD1
271
Missense
Exon 9
c.1177 C
>
T
p.R393W
MSD1
272
In-frame indel
Exon 10
c.1256 1272indelCT
c
p.E419 M424indelA
Disruption of MSD1
273
Missense
Exon 10
c.1321 C
>
A
c
p.L441M
MSD1
274
Splicing
Exon 13
c.1815
+
2T
>
A
Exon 13 skipping
Disruption of MSD1
275
Splicing
Exon 15
c.1967
+
2T
>
C
p.K635X
Truncation in NBD1
276
Missense
Exon 16
c.2026 G
>
C
c
p.G676R
NBD1
277
Missense
Exon 17
c.2125 T
>
C
p.W709R
NBD1
278
Missense
Exon 18
c.2302 C
>
T
p.R768W
NBD1
275
Splicing
Exon 18
c.2439
+
2T
>
C
Exon 18 skipping
Disruption of NBD1
20
c.2748 2838del
c
Deletion
Exon 21
p.S916fsX
Truncation in MSD2
274
Nonsense
Exon 23
c.3196 C
>
T
p.R1066X
Truncation in MSD2
156
c.3399 3400del
c
Deletion
Exon 24
p.Y1134CfsX
Truncation in MSD2
274
Missense
Exon 25
c.3449 G
>
A
p.R1150H
MSD2
279
Missense
Exon 25
c.3517 A
>
T
p.I1173F
MSD2
279
c.3615 3843del
c
Deletion
Exon 26
p.W1206fsX
Truncation in MSD2
274
c.3825 C
>
G
c
Nonsense
Exon 27
p.Y1275X
Truncation in MSD2
274
c.3928 C
>
T
c
Nonsense
Exon 28
p.R1310X
Truncation in NBD2
282
c.4054 G
>
C
c
Missense
Exon 29
p.E1352Q
NBD2
274
>
G
c
Missense
Exon 29
c.4145 A
p.Q1382R
NBD2
20
Deletion
Exon 30
c.4175 4180del
p.R1392 M1393del
NBD2
19
Deletion
Exon 30
c.4292 4293del
c
p.T1431RfsX
Truncation in NBD2
273
a
As recommended by the Human Genome Variation Society (http://www.hgvs.org/mutnomen) and by ref. 263, nucleotide position
+
1 is the A of the ATG of the
translation initiation codon in the
ABCC2
cDNA sequence, “c.” describes a nucleotide change in relation to the
ABCC2
cDNA sequence (NM 000392), “p.” describes
a change in relation to the ABCC2 protein sequence deduced (NP 000383), “X” denotes a premature stop codon, “fs” denotes a frame shift, and “indel” denotes
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