Biomedical Engineering Reference
In-Depth Information
tumor onset is usually of interest but not directly observable. Instead, only
the death or sacrifice time of an animal is observed along with the presence or
absence of a tumor at the time. If the tumor can be considered to be rapidly
lethal, meaning that its occurrence kills the animal right away, it is reasonable
to treat the time as an exact or right-censored observation of the tumor onset
time. On the other hand, if the tumor is nonlethal, then it is reasonable to
assume that the tumor onset time and death time are independent of given
treatments.
The data considered here arose from 144 male RFM mice and consist of the
death time of each animal measured in days and an indicator of lung tumor
presence (z i = 1) or absence (z i = 0) at the time of death. The experiment
involves two treatments: conventional environment (96 mice) and germ-free
environment (48 mice). One of the objectives of the study was to compare the
lung tumor incidence rates of the two treatment groups and lung tumors in
RFM mice are predominantly nonlethal. The authors who have discussed this
set of data include Hoel and Walburg (1972) and Huang (1996).
To analyze the data, define zi i = 1 if the i-th animal was in the conven-
tional environment, and 0 otherwise. As mentioned in Section 4.4, the PH
model and proportional odds model are special cases of the linear transforma-
tion model. For the survival time T, suppose the baseline hazard function of
the error term in the model Equation (4.3) takes the form
exp(t)
1 + r exp(t) ;
(t) =
where r is a constant. This model corresponds to the proportional hazards
model if r = 0 and gives the proportional odds model if letting r = 1.
We obtained ^ n = 0:5576 with the estimated standard error of 0.3201 for
r = 0. By taking r = 0:5 and 1, we have ^ n = 1:0679 and 1:2226 with
the corresponding standard errors being 0.5533 and 0.6315, respectively. These
yielded p-values 0.082, 0.054, and 0.053 for testing 0 = 0 or no treatment
dierence with r = 0; r = 0:5, and r = 1, respectively, which indicates that
 
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