Omics approaches and abiotic stress tolerance in legumes - Legumes Under Environmental Stress: Yield, Improvement and Adaptations - page 228

Broughton WJ, Hernández G, Blair M, Beebe S, Gepts P,
Vanderleyden JB (2003) Beans ( Phaseolus spp.) - model food
legumes. Plant Soil 252: 55-128.
Bruce TJ (2012) GM as a route for delivery of sustainable crop
protection. J Exp Bot 63: 537-541.
Butte A (2002) The use and analysis of microarray data. Nat Rev
Drug Discov 1: 951-960.
Cannon SB (2013) The Legume Information System 2013. In:
Plant and Animal Genome XXI Conference, San Diego, CA,
Jan 12-16, P0952.
Carlos de Ollas, Gómez-Cadenas A, Arbona V, Manzi M (2013)
Metabolomics as a tool to investigate abiotic stress tolerance
in plants. Int J Mol Sci 14: 4885-4911.
Casler M, van Santen E (2010) Breeding objectives in for-
ages. In: Boller B, Posselt U, Veronesi F (eds), Handbook of
Plant Breeding: Fodder Crops and Amenity Grasses . Springer
Science + Business Media, New York, pp. 115-160.
Chalk PM, Alves BJR, Boddey RM, Urquiaga S (2010) Integrated
effects of abiotic stresses on inoculants performance, legume
growth and symbiotic dependence estimated by 15N dilu-
tion. Plant Soil 328: 1-16.
Cook DR (1999) Medicago truncatula : a model in the making!
Commentary. Curr Opin Plant Biol 2: 301-304.
Correa R, Stanga J, Larget B, et al. (2012) An assessment of
transgenomics as a tool for identifying genes involved in the
evolutionary differentiation of closely related plant species.
New Phytol 193: 494-503.
Cramer GR, Urano K, Delrot S, Pezzotti M, Shinozaki K (2011).
Effects of abiotic stress on plants: a systems biology perspec-
tive. BMC Plant Biol 11: 163.
De Domenico S, Bonsegna S, Horres R, et al. (2012)
Transcriptomic analysis of oxylipin biosynthesis genes and
chemical profiling reveal an early induction of jasmonates in
chickpea roots under drought stress. Plant Physiol Biochem 61:
115-122.
Deeplanaik N, Kumaran RC, Venkatarangaiah K, Shivashankar
SKH, Doddamani D, Telkar S (2013) Expression of drought
responsive genes in pigeonpea and in silico comparison with
soybean cDNA library. J Crop Sci Biotech 16: 243-251.
Dita MA, Rispail N, Prats E, Rubiales D, Singh KB (2006)
Biotechnology approaches to overcome biotic and abiotic
stress constraints in legumes. Euphytica 147: 1-24.
Dixon RA (2001) Natural products and plant disease resistance.
Nature 411: 843-847.
Dong Z, Shi L, Wang Y, et al. (2013) Identification and dynamic
regulation of microRNAs involved in salt stress responses in
functional soybean nodules by high-throughput sequencing.
Int J Mol Sci 14: 2717-2738.
Doyle JJ (2013) The promise of genomics for a “next genera-
tion” of advances in higher-level legume molecular system-
atics. S Afr J Bot 89: 10-18.
Dreher K, Khairallah M, Ribaut JM, Morris M (2003) Money
matters (I): costs of field and laboratory procedures associ-
ated with conventional and marker-assisted maize breeding
at CIMMYT. Mol Breed 11: 221-234.

Farre G, Ramessar K, Twyman RM, Capell T, Christou P (2010)
The humanitarian impact of plant biotechnology: Recent
breakthroughs vs bottlenecks for adoption. Curr Opin Plant
Biol 13: 219-225.
Garg R, Patel RK, Jhanwar S, et al. (2011) Gene discovery and
tissue-specific transcriptome analysis in chickpea with
massively parallel pyrosequencing and web resource
development. Plant Physiol 156: 1661-1678.
Gaxiola RA, Fink GR, Hirschi KD (2002) Genetic manipulation
of vacuolar proton pumps and transporters. Plant Physiol 129:
967-973.
Gruber V, Blanchet S, Diet A, et al. (2009) Identification of tran-
scription factors involved in root apex responses to salt stress
in Medicago truncatula . Mol Genet Genomics 281: 55-66.
Gupta S, Nadarajan N, Gupta DS (2014) Legumes in omic era:
Retrospects and prospects. In: Gupta S, Nadarajan N, Gupta DS
(eds), Legumes in the Omic Era . Springer, New York, pp. 1-14.
Hakeem KR, Chandna R, Ahmad P, Iqbal M, Ozturk M (2012)
Relevance of proteomic investigations in plant abiotic stress
physiology. OMICS: J Integr Biol 16: 621-635.
Handberg K, Stougaard J (1992) Lotus japonicus : an autoga-
mous, diploid legume species for classical and molecular
genetics. Plant J 2: 487-496.
Hernández G, Ramírez M, Valdés-López O, et al. (2007)
Phosphorus stress in common bean: Root transcript and met-
abolic responses. Plant Physiol 144: 752-767.
Hinchee MAW, Connor-Ward DV, Newell CA, et al. (1988)
Production of transgenic soybean plants using agrobacte-
rium-mediated DNA transfer. Nat Biotechnol 6: 915-922.
Huang CJ, Qian YJ, Li ZH, Zhou XP (2012) Virus-induced gene
silencing and its application in plant functional genomics. Sci
China Life Sci 55: 99-108.
Jensen ES, Peoples MB, Boddey RM, et al. (2012) Legumes for
mitigation of climate change and the provision of feedstock
for biofuels and biorefineries: A review. Agron Sustain Dev 32:
329-364.
Jogaiah S, Govind SR, Tran LSP (2012) Systems biology-based
approaches toward understanding drought tolerance in food
crops. Crit Rev Biotech 33: 23-39.
Jorrin JV, Rubiales D, Dumas-Gaudot E, et al. (2006) Proteomics:
a promising approach to study biotic interaction in legumes:
a review. Euphytica 147: 37-47.
Jukanti AK, Gaur PM, Gowda CLL, Chibbar RN (2012)
Nutritional quality and health benefits of chickpea ( Cicer ari-
etinum L.): A review. Br J Nutr 108: 11-26.
Kalo P, Seres A, Taylor SA, et al. (2004) Comparative mapping
between Medicago sativa and Pisum sativum . Mol Genet Genomics
272: 235-246.
Komatsu S, Yamamoto R, Nanjo Y, Mikami Y, Yunokawa H,
Sakata K (2009) A comprehensive analysis of the soybean
genes and proteins expressed under flooding stress using
transcriptome and proteome techniques. J Proteome Res 8:
4766-4778.
Komatsu S, Kuji R, Nanjo Y, Hiraga S, Furukawa K (2012)
Comprehensive analysis of endoplasmic reticulum-enriched