Oxidized Base Damage and Single-Strand Break Repair in Mammalian Genomes: Role of Disordered Regions and Posttranslational Modifications in Early Enzymes - Progress in Molecular Biology - page 142

5. Di Noia JM, Neuberger MS. Molecular mechanisms of antibody somatic hypermutation.
Annu Rev Biochem 2007; :1-22.

6. Doseth B, Visnes T, Wallenius A, Ericsson I, Sarno A, Pettersen HS, et al. Uracil-DNA
glycosylase in base excision repair and adaptive immunity: species differences between man
and mouse. J Biol Chem 2011;

76

:16669-80.
7. Dizdaroglu M. Base-excision repair of oxidative DNA damage by DNA glycosylases. Mutat
Res 2005;

286

:45-59.
8. Hegde ML, Hazra TK, Mitra S. Early steps in the DNA base excision/single-strand interrup-
tion repair pathway in mammalian cells. Cell Res 2008;

591

:27-47.
9. Mitra S, Izumi T, Boldogh I, Bhakat KK, Hill JW, Hazra TK. Choreography of oxidative
damage repair in mammalian genomes. Free Radic Biol Med 2002;

18

:15-28.
10. Dodson ML, Lloyd RS. Mechanistic comparisons among base excision repair glycosylases.
Free Radic Biol Med 2002;

33

:678-82.
11. Wiederhold L, Leppard JB, Kedar P, Karimi-Busheri F, Rasouli-Nia A, Weinfeld M, et al. AP
endonuclease-independent DNA base excision repair in human cells. Mol Cell 2004;

32

:209-20.
12. Hildrestrand GA, Neurauter CG, Diep DB, Castellanos CG, Krauss S, Bjoras M, et al.
Expression patterns of Neil3 during embryonic brain development and neoplasia. BMC
Neurosci 2009;

15

:45.
13. Takao M, Oohata Y, Kitadokoro K, Kobayashi K, Iwai S, Yasui A, et al. Human Nei-like protein
NEIL3 has AP lyase activity specific for single-stranded DNA and confers oxidative stress
resistance in Escherichia coli mutant. Genes cells 2009;

10

:261-70.
14. Russo MT, De Luca G, Degan P, Bignami M. Different DNA repair strategies to combat the
threat from 8-oxoguanine. Mutat Res 2007;

14

:69-76.
15. Sobol RW, Prasad R, Evenski A, Baker A, Yang XP, Horton JK, et al. The lyase activity of the
DNA repair protein beta-polymerase protects from DNA-damage-induced cytotoxicity.
Nature 2000;

614

:807-10.
16. Frosina G, Fortini P, Rossi O, Carrozzino F, Raspaglio G, Cox LS, et al. Two pathways for base
excision repair in mammalian cells. J Biol Chem 1996;

405

:9573-8.
17. Liu Y, Kao HI, Bambara RA. Flap endonuclease 1: a central component of DNA metabolism.
Annu Rev Biochem 2004;

271

:589-615.
18. Zheng L, Zhou M, Guo Z, Lu H, Qian L, Dai H, et al. Human DNA2 is a mitochondrial
nuclease/helicase for efficient processing of DNA replication and repair intermediates. Mol
Cell 2008;

73

:325-36.
19. Duxin JP, Dao B, Martinsson P, Rajala N, Guittat L, Campbell JL, et al. Human Dna2 is a
nuclear and mitochondrial DNA maintenance protein. Mol Cell Biol 2009;

32

:4274-82.
20. Prasad R, Dianov GL, Bohr VA, Wilson SH. FEN1 stimulation of DNA polymerase beta
mediates an excision step in mammalian long patch base excision repair. J Biol Chem
2000;

29

:4460-6.
21. Podlutsky AJ, Dianova II, Podust VN, Bohr VA, Dianov GL. Human DNA polymerase beta
initiates DNA synthesis during long-patch repair of reduced AP sites in DNA. EMBO J
2001;

275

:1477-82.
22. Klungland A, Lindahl T. Second pathway for completion of human DNA base excision-repair:
reconstitution with purified proteins and requirement for DNase IV (FEN1). EMBO J
1997;

20

:3341-8.
23. Matsumoto Y, Kim K, Hurwitz J, Gary R, Levin DS, Tomkinson AE, et al. Reconstitution of
proliferating cell nuclear antigen-dependent repair of apurinic/apyrimidinic sites with puri-
fied human proteins. J Biol Chem 1999;

16

:33703-8.
24. Matsumoto Y, Kim K. Excision of deoxyribose phosphate residues by DNA polymerase beta
during DNA repair. Science 1995;

274

:699-702.

269