Biomedical Engineering Reference
In-Depth Information
I
(nA)
1
-2
2
V
(V)
-1
Fig. 1.37
The Zenner behavior of DNA between two electrodes
This is the typical semiconductor behavior of DNA, with a bandgap of about 1 eV
at room temperature. It was shown that the overlapping of the orbitals in the base-
pair stack coupled to the backbone is enough to explain the opening of the bandgap
in short DNA base sequences at room temperatures (
Cuniberti et al. 2002
). Using
a Hamiltonian approach, it was evidenced that backbone coupling of overlapping
orbitals controls the energy gap opening in electron transmission along a DNA
oligomer consisting of 30 G-C base pairs.
In this case, the transmission is written as
4ı
2
sin
2
Œsin.N
C
1/
ı
2
sin.N
1/
2
T
D
C
4ı
2
sin
2
N
;
(1.33)
where ˆ
D
cos is the backbone coupling parameter and N is the number of
resonances at the molecular orbitals, which are broadened by the spectral density
parameter ı. The gap opening is easily understandable by the dispersion equation of
the infinite G-C lattice: ˆ.E/
D
cosq,whereq is the adimensional longitudinal
momentum of the lattice. The lack of electronic states between LUMO and HOMO
determines the bandgap opening.
The charge propagates along the orbitals by nearest-neighbor hopping with
probabilities t
a
and/or is hybridized at the two edges of the structure with probabili-
ties t
b˙
. Based on this conduction mechanism model, a model of charge propagation
in C-G periodic base pairs forming a short DNA molecule is depicted in Fig.
1.38
.
The localized charges at the central and edge states are denoted by b and c
˙
,
respectively, with an additional label indicating the specific base pair.
Using the above model and assuming that t
bC
D
t
b
D
t
b
, the gap in
transmission, which corresponds to a gap in the current according to the Landauer
formula, is given by
T
g
D
2.t
a
C
t
b
/
1=2
2t
a
(1.34)
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