Biology Reference
In-Depth Information
Interdisciplinary Center for Mathematical and Computational Modelling (ICM), Warsaw, Po-
land, grant number G30-18 and under resources of CSC, Finland.
References
Ashkenazy, H., Erez, E., Martz, E., Pupko, T., & Ben-Tal, N. (2010). ConSurf 2010: Calculating
evolutionary conservation in sequence and structure of proteins and nucleic acids.
Nucleic
Audet, M., & Bouvier, M. (2012). Restructuring G-protein-coupled receptor activation.
Cell
,
151
(1), 14-23.
http://dx.doi.org/10.1016/j.cell.2012.09.003
.
Baker, N. A., Sept, D., Joseph, S., Holst, M. J., & McCammon, J. A. (2001). Electrostatics of
nanosystems: Application to microtubules and the ribosome.
Proceedings of the National
Bruno, A., Costantino, G., de Fabritiis, G., Pastor, M., & Selent, J. (2012). Membrane-sensitive
conformational states of helix 8 in the metabotropic Glu2 receptor, a class C GPCR.
PLoS
Callenberg, K. M., Choudhary, O. P., de Forest, G. L., Gohara, D. W., Baker, N. A., &
Grabe, M. (2010). APBSmem: A graphical interface for electrostatic calculations at the
De Vries, S. J., van Dijk, M., & Bonvin, A M J J (2010). The HADDOCK web server for data-
Ding, X., Zhao, X., & Watts, A. (2013). G-protein-coupled receptor structure, ligand binding
and activation as studied by solid-state NMR spectroscopy.
The Biochemical Journal
,
450
(3), 443-457.
http://dx.doi.org/10.1042/BJ20121644
.
Dror, R. O., Arlow, D. H., Maragakis, P., Mildorf, T. J., Pan, A. C., Xu, H., et al. (2011). Ac-
tivation mechanism of the
b
2
-adrenergic receptor.
Proceedings of the National Academy of
Dror, R., Pan, A., Arlow, D. H., Borhani, D. W., Maragakis, P., Shan, Y., et al. (2011). Pathway
and mechanism of drug binding to G-protein-coupled receptors.
Proceedings of the Na-
tional Academy of Sciences of the United States of America
,
108
(32), 13118-13123.
Floquet, N., M'Kadmi, C., Perahia, D., Gagne, D., Berg
ยด
, G., Marie, J., et al. (2010). Activa-
tion of the ghrelin receptor is described by a privileged collective motion: A model for
constitutive and agonist-induced activation of a sub-class A G-protein coupled receptor
Ghanouni, P., Gryczynski, Z., Steenhuis, J. J., Lee, T. W., Farrens, D. L., Lakowicz, J. R., et al.
(2001). Functionally different agonists induce distinct conformations in the G protein cou-
pling domain of the beta 2 adrenergic receptor.
Journal of Biological Chemistry
,
276
(27),
24433-24436.
http://dx.doi.org/10.1074/jbc.C100162200
.
