Biomedical Engineering Reference
In-Depth Information
Linux. This has had the unexpected impact of creating a global system,
which was originally targeted for a few local users.
12.3 Technical overview
Our initial implementation of CoDD was part of our group wiki, which
is a MediaWiki installation [8]. MediaWiki is written in PHP [9] and
runs using Apache and MySQL. Our server had everything needed to run
this: Red Hat Enterprise Linux [10]. What makes our wiki stand out is
the integrated chemistry via the MediaWiki plug-in system. We wrote a
small PHP plug-in to enable to the use of <smiles></smiles> and <az></
az> tags. Both would return an image of the SMILES specifi ed or the AZ
number. An AZ number is a reference to a compound in the AstraZeneca
compound collection. Figure 12.3 shows the use of the <smiles> tag and
how we can alter the size and title of the image.
Using the smiles tag within our internal wiki.
Options such as image dimensions and title can
optionally be specifi ed
Figure 12.3
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