Biomedical Engineering Reference
In-Depth Information
6.7 References
[1] KNIME.
http://www.knime.org/
. Accessed 18 August 2011.
[2] KNIME.com.
http://www.knime.com/products
. Accessed 18 August 2011.
[3] KNIME Community Contributions.
http://tech.knime.org/community
.
Accessed 18 August 2011.
[4] GGA Software Services LLC. Indigo.
http://ggasoftware.com/opensource/
indigo
. Accessed 18 August 2011.
[5] RDKit.
http://www.rdkit.org/
. Accessed 18 August 2011.
[6] Imglib.
http://pacifi c.mpi-cbg.de/wiki/index.php/Imglib
. Accessed 18
August 2011.
[7] Jagla B, Wiswesdel B and Coppee JY. Extending KNIME for Next
Generation Sequencing data analysis.
Bioinformatics
, 2011;20:2907-9.
[8] Langmead B, Trapnell C, Pop M, Salzberg SL. Ultrafast and memory-
effi cient alignment of short DNA sequences to the human genome.
Genome
Biol
10:R25.
[9] BEDGraph.
http://genome.ucsc.edu/goldenPath/help/bedgraph.html
.
Accessed 17 August 2011.
[10] Gbrowse.
http://gmod.org/wiki/GBrowse
. Accessed 27 December 2011.
[11] Kent WJ et al. The human genome browser at UCSC.
Genome Res
2002;12(6):996-1006.
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