Biomedical Engineering Reference
In-Depth Information
161.
Wang, A.H.J. (1992). Intercalative Drug Binding to DNA. Curr. Opin. Struc. Biol . 2:361-368.
162.
Benos, P.V., Lapedes, A.S., Stormo, G.D. (2002). Is there a Code for Protein-DNA Recognition?
Probab(ilistical)ly. BioEssays 24:466-475.
163.
Berman, H.M., Olson, W.K., Beveridge, D.M., Westbrook, J., Gelbin, A., Dememy, T., Hsieh,
S.H., Srinivasan, A.R., Schneider, B. (1992). The Nucleic Acid Database: A Comprehensive
Relational Database of Three-Dimensional Structures of Nucleic Acids. Biophys. J. 63:751-759.
URL: http://ndbserver.rutgers.edu
164.
Luscombe, N.M., Austin, S.E., Berman, H.M., Thornton, J.M. (2000). An Overview of the
Structure of Protein-DNA Complexes. Genome Biol. 1:1-37.
165.
Olson, W.K., Zhurkin, V.B. (2000). Modeling DNA Deformations. Curr. Opin. Struc. Biol .
10:286-297.
166.
Jones, S., Thornton, J.M. (2003). Protein-DNA Interactions: The Story so far and a New
Method for Prediction. Comp. Func. Genom . 4:428-431.
167.
Olson, W.K., Gorin, A.A., Xiang, J.L., Hock, L.M., Zhurkin, V.B. (1998). DNA Sequence-
Dependent Deformability Deduced from Protein-DNA Crystal Structures. Proc. Natl. Acad.
Sci. USA 95:11163-11168.
168.
Westermann, S., Cheeseman, I.M., Anderson, S., Yates III, J.R., Drubin, D.G., Barnes, G. (2003).
Architecture of the Budding Yeast Kinetochore Reveals a Conserved Molecular Core. J. Biol.
Chem . 163:215-222.
169.
Hegeman, J.H., Flieg, U.N. (1993). The Centromere of Budding Yeast. BioEssays 15:451-460.
170.
Henemuth, B., Marx, K.A. (2006). Protein Deformability Properties of Single Base Mutants of
Yeast DNA Kinetochore Protein Binding Sites Correlate with Measured Chromosomal Loss
Rates for the Mutants in Yeast Cells. BMC Mol. Biol. 7:12-20.
171.
Watson, J.D., Crick, F.H.C. (1953). Molecular Structure of Nucleic Acids. Nature 171:737-738.
172.
Baisnee, P.F., Baldi, P., Brunak, S., Pedersen, A.G. (2001). Flexibility of the Genetic Code With
Respect to DNA Structure. Bioinformatics 17:237-248.
173.
Witten, I.H., Frank, E. (2000). Data Mining: Practical Machine Learning Tools and Techniques
with Java Implementations. San Francisco: Morgan Kaufmann.
174.
http://www.microarray.org/sfgf/jsp/home.jsp (accessed May 27, 2005).
175.
Schafer, J.L. (1997). Analysis of Incomplete Multivariate Data. Monographs on Statistics and
Applied Probability. Vol. 72. London, UK: Chapman & Hall/CRC.
176.
Jen, J. (2005). Distinguishing Lung Tumors Based Upon Small Numbers of Genes Using Flow-
Through-Chips. National Cancer Institute, Bethesda, MD.
177.
McCarthy, J.F., Marx, K.A., Hoffman, P.E., Gee, A.G., O'Neil, P., Ujwal, M.L., Hotchkiss, J.
(2004). Applications of Machine Learning and High-Dimensional Visualization in Cancer
Detection, Diagnosis and Mangement. In: Umar, A., Kapetanovic, I., Khan, J., eds. The
Applications of Bioinformatics in Cancer Detection, Ann. N.Y. Acad. Sci. 1020:239-262.
178.
Meyerson, M. Dana-Farber Cancer Institute, http://research.dfci.harvard.edu/meyerson-
lab/lungca/data.html (accessed 2003).
179.
Affymetrix, Inc., Santa Clara, CA., http://www.affymetrix.com (2003).
180.
Grinstein, G., Jessee. C.B., Hoffman, P., O'Neil, P., Gee, A. (2002). High-Dimensional
Visualization Support for Data Mining Gene Expression Data. In: Grigorenko, E.V., ed. DNA
Arrays, Technologies and Experimental Strategies. New York, NY: CRC Press.
181.
Marx, K.A., O'Neil, P., Hoffman, P., Ujwal, M.L. (2003). Data Mining the NCI Cancer Cell Line
Compound GI 50 Values: Identifying Quinone Subtypes Effective against Melanoma and
Leukemia Cell Classes. J. Chem. Inf. Comput. Sci. 43:1652-1667.
182.
Gad-el-Hak, M. (2002). The MEMS Handbook. Boca Raton, FL: CRC Press.
183.
Patolsky, F, Zheng, G., Hayden, O., Lakadamyali, M., Zhuang, X., Lieber, C.M. (2004).
Electrical Detection of Single Viruses. Proc. Natl. Acad. Sci. USA 101:14017-14022.
184
Cooper, M.A., Dultsev, F.A., Minson, T., Ostanin, V.P., Abell, C., Klenerman, D. (2001). Direct
and Sensitive Detection of a Human Virus by Rupture Event Scanning. Nat. Biotechnol .
19:833-837.
185.
Hahm, J.L., Lieber, C.M. (2004). Direct Ultrasensitive Electrical Detection of DNA and DNA
Sequence Variations using Nanowire Nanosensors. Nanoletters 4:51-54.
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