Biomedical Engineering Reference
In-Depth Information
a
U2AF
70K
U2
snRNP
U1
snRNP
hnRNP-G SRp30c
SF2/ASF
hTra2b1
hnRNP-Q
Element 1
ISS-N1
C
T
Exon 6
Exon 7
Exon 8
PTB/Fuse
hnRNPA1/2
hnRNPA1
Decrease Exon7 Inclusion
Increase Exon7 Inclusion
b
SMN2 pre mRNA
Cis-splicing
90%
10%
Exon 6
Exon 7
10%
Exon 6
Exon 8
90%
P(PY)
BP
Exon 6
Exon 7
Exon 8
7-11
BP
7 -11
M13
U6
tsRNA + 7-11
Poly A
P(PY)
Trans-splicing
SMN1 Exon7
M13 Poly A
Trans-spliced RNA
Exon 6
Exon 7
Fig. 1 Schematic of the exon 7 regulation within SMN pre-mRNA and trans -splicing strategy to replace the
SMN2 exon 7. ( a ) SMN pre-mRNA is regulated by cis elements (within intron 6, exon 7, and intron 7) and splic-
ing factors which are involved in the inclusion or exclusion of exon 7. The components of the splicing machin-
ery are shown in yellow . The positively acting splicing factors are shown in green . The negatively acting
sequences and splicing factors are shown in red . The C-T transition that creates a splice silencer site in SMN2
transcript is indicated. ( b ) Cis -splicing of SMN2 pre-mRNA produces two mRNAs due to an alternative splicing
event. Trans - splicing strategy utilizes a tsRNA that consists of (1) an antisense domain that binds to intron 6
and blocks the endogenous branch point; (2) the splicing domain with optimal branch point, polypyrimidine
tract, and 3' splice site that carry out the splicing reaction between the SMN2 pre-mRNA and tsRNA; and (3)
the SMN1 exon 7 which replaces SMN2 exon 7 following a trans -splicing event. The generation of the trans -
spliced RNA is verifi ed by using a primer specifi c for the M13 sequence located downstream of the exon 7 stop
codon. Antisense oligonucleotide (7-11) expressed from the U6 promoter is located downstream of the tsRNA
sequence and binds the 3
splice site of exon 8
subcutaneous injections [ 46 ]. Gene therapy applications utilizing
gene correction system by therapeutic RNAs in SMA have been
reviewed in detail [ 50 - 54 ]; therefore, we will only discuss the gene
replacement therapy using viral vectors.
First gene replacement strategy in SMA utilized a lentiviral vector
expressing full-length human SMN cDNA that was retrogradely
transported into motor neurons following multiple injections
into a large number of muscles in SMN
1.1.5 SMA Gene
Replacement Therapy
7 mice [ 55 ]. The out-
come was more viable motor neurons and a modest extension in
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