MICROBIAL MONITORING DURING BIOAUGMENTATION WITH DEHALOCOCCOIDES - Bioaugmentation for Groundwater Remediation - page 193

Liu W, Marsh T, Cheng H, and Forney L. 1997. Characterization of microbial diversity
by determining terminal restriction fragment length polymorphisms of genes encoding
16S rRNA. Appl Environ Microbiol 63:4516-4522.
L¨ffler FE, Sun Q, Li J, Tiedje JM. 2000. 16S rRNA gene-based detection of tetrachloroethene-
dechlorinating Desulfuromonas and Dehalococcoides species. Appl Environ Microbiol
66:1369-1374.
Lookman R, Paulus D, Marnette E, Pijls C, Ryngaert A, Diels L, Volkering F. 2007. Ground
water transfer initiates complete reductive dechlorination in a PCE-contaminated aquifer.
Ground Water Monitor Remediat 3:65-74.
Lu X, Wilson JT, Kampbell DH. 2006. Relationship between Dehalococcoides DNA in ground
water and rates of reductive dechlorination at field scale. Water Res 40:3131-3140.
Lu X, Wilson JT, Kampbell DH. 2009. Comparison of an assay for Dehalococcoides DNA and
a microcosm study in predicting reductive dechlorination of chlorinated ethenes in the
field. Environ Pollut 157:809-815.
Madigan MT, Martinko JM, and Parker J. 2003. Brock Biology of Microorganisms. Tenth
edition, Pearson Education, NJ, USA.
Major DW, McMaster ML, Cox EE, Edwards EA, Dworatzek SM, Hendrickson ER, Starr MG,
Payne JA, Buonamici LW. 2002. Field demonstration of successful bioaugmentation to
achieve dechlorination of tetrachloroethene to ethene. Environ Sci Technol 36:5106-5116.
Peacock AD, Chang YJ, Istok JD, Krumholtz L, Geyer R, Kinstall B, Watson D, Sublette KL,
White DC. 2004. Utilization of microbial biofilms as monitors of bioremediation. Microbial
Ecol 473:284.
Polz MF, Cavanaugh CM. 1998. Bias in template-to-product ratios in multitemplate PCR.
Appl Environ Microbiol 64:3724-3730.
Puls RW, Barcelona MJ. 1996. Low-flow (minimal drawdown) ground water sampling pro-
cedures. USEPA, Ground Water Issue, EPA/540/S-95/504:1-12.
Regeard C, Maillard J, Holliger C. 2004. Development of degenerate and specific PCR primers
for the detection and isolation of known and putative chloroethene reductive dehalogenase
genes. J Microbiol Method 56:107-118.
Regenesis. 2011. Case studies for enhanced aerobic bioremediation. www.regenesis.com .
Accessed May 2011.
Reysenbach A-L, Giver LJ, Wickham GS, Pace NR. 1992. Differential amplification of rRNA
genes by polymerase chain reaction. Appl Environ Microbiol 58:3417-3418.
Ritalahti KM, L¨ffler FE, Rasch EE, Koenigsberg SS. 2005. Bioaugmentation for chlorinated
ethene detoxification: Bioaugmentation and molecular diagnostics in the bioremediation of
chlorinated ethene-contaminated sites. Ind Biotechnol 1:114-118.
Ritalahti KM, Amos BK, Sung Y, Wu Q, Koenigsberg SS, L¨ffler FE. 2006. Quantitative PCR
targeting 16S rRNA and reductive dehalogenase genes simultaneously monitors multiple
Dehalococcoides strains. Appl Environ Microbiol 72: 2765-2774.
Ritalahti KM, Hatt JK, Lugmayr V, Henn K, Petrovskis EA, Ogles DM, Davis GA, Yeager CM,
Lebr´ n CA, L¨ffler FE. 2010. Comparing on-site to off-site collection for Dehalococcoides
biomarker gene quantification to predict in situ chlorinated ethene detoxification potential.
Environ Sci Technol 44:5127-5133.
SERDP and ESTCP (Strategic Environmental Research and Development Program and
Environmental Security Technology Certification Program). 2005. Research and Develop-
ment Needs for the Environmental Remediation Application of Molecular Biological Tools.
SERDP and ESTCP, Arlington, VA, US. http://www.serdp-estcp.org/content/download/
8239/101230/version/1/file/MBT-Workshop-Report-2005.pdf . Accessed December 13, 2011.