Biomedical Engineering Reference
In-Depth Information
Table 2.7. (continued)
Dehalococcoides
16S rRNA Gene -
Targeted
Probe/
Primer
Nucleotide
Position
Sequence (5 0 -3 0 )
Chemistry
Reference
tceA gene
tceAF
TaqMan
ATCCAGATTATGACCCTGGTGAA
446-468
Holmes et al., 2006 ; Ritalahti et al., 2006 ;
Johnson et al., 2005
tceAR
TaqMan
GCGGCATATATTAGGGCATCTT
512-491
Holmes et al., 2006 ; Ritalahti et al., 2006 ;
Johnson et al., 2005
tceAP
TaqMan
TGGGCTATGGCGACCGCAGG
470-489
Holmes et al., 2006 ; Ritalahti et al., 2006 ;
Johnson et al., 2005
tceA gene
tceA-500 F SYBR green
TAATATATGCCGCCACGAATGG
500-521
Fung et al., 2007
tceA-795R SYBR green
AATCGTATACCAAGGCCCGAGG
816-795
Fung et al., 2007
pceA gene
DET0318-
484f
SYBR green
ATGGTGGATTTAGTAGCAGCGGTC
505-528
Fung et al., 2007
DET0318-
664r
SYBR green
ATCATCAAGCTCAAGTGCTCCCAC
708-685
Fung et al., 2007
cbrA gene
cbdbA84_f SYBR green
CTTATATCCTCAAAGCCTGA
118-137
Wagner et al., 2009
cbdbA84_r SYBR green
TGTTGTTGGCAACTGCTTC
319-301
Wagner et al., 2009
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