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Figure 10.4 Circular/circular recombination.
DEFINITION 2 Let J ⊆ Σ + be a set of plugs. We define the set of elementary
cables (respectively, left elementary cables and right elementary cables) with
plugs in J as
= (J Σ + ∩ Σ + J) \ Σ + J Σ + ,
E J
= Σ J \ Σ J Σ + ,
L J
Σ \ Σ + J
Σ .
R J
=
J
vz 2 , where z 1 ,z 2
J are plugs. In other words, an elementary cable starts with a plug, ends with
a plug, and contains no other plugs as subwords. The start and end plug can
overlap.
A left elementary cable is of the form wz , where z
Note that an elementary cable in E J is of the form z 1 u
=
J is a plug and wz does
not contain any other plug as a subword. In other words, if we scan wz from
left to right, z is the first plug we encounter. Analogously, a right elementary
cable is of the form zw , where z J is a plug and wz does not contain any
other plug as a subword.
DEFINITION 3 For a set of plugs J ⊆ Σ + and a linear word w ∈ Σ + , the set
of elementary cables with plugs in J occurring in w is defined as
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