Biomedical Engineering Reference
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Fig. 1.14 Number of water molecules inside the carbon nanotube with respect to time in several
representative systems (reprinted from [ 129 ]. Copyright 2008 American Physical Society)
N D 5and N D 6 are 0.96 and 0.90 ps, respectively, showing similar probabilities
for two states. When ı D 0 A, the total probabilities of N D 5, 6 are about 52 and
48%, both close to 50%.
The free energy of occupancy fluctuations G ( N ) can be calculated by G.N / D
k B T ln p.N /,where p ( N ) is the probability of N water molecules inside the
nanotube, k B is the Boltzmann constant, and T is the temperature.
Figure 1.15 shows that the free energy of N D 5 is close to the free energy of
N D 6forı 6 ı c 2:0 A. Profile of free energy of occupancy shows that two
states of N D 5and N D 6aresteadyforı 6 ı c 2:0 A. The rapid transitions
between the two states in the water permeation across the CNT are similar to those
observed in the KcsA ion channel. However, for ı>ı c , free energy of N D 4is
the minimum. The behavior of the single-filed water molecules inside the nanotube
becomes different.
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