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sufficient by itself to elucidate the mechanism of function of the ribozyme,
and careful biochemical analyses have proven to be the key for providing
definitive answers. It is highly probable that understanding spliceosomal
catalysis will likewise require in-depth biochemical characterization,
whichinturnnecessitatesthedevelopment of simplified models for the
spliceosomal catalytic core that are amenable to detailed analysis. The
recent availability of a high-resolution structure for a group II intron ribo-
zyme has enabled the formulation of testable hypotheses addressing the
similarities between group II intron and spliceosome active site organiza-
tion, and it will likely have a significant impact on understanding the
function of the spliceosomal catalytic core. Whether the spliceosome
proves to have an RNA active site heavily buttressed by proteins, or
one composed of both RNA and protein functional groups, it remains a
fascinating example of transition from the RNA world into the present
protein-dominated world.
REFERENCES
1. Roy SW, Irimia M. Splicing in the eukaryotic ancestor: form, function and dysfunc-
tion. Trends Ecol Evol (Amst) . 2009;24(8):447-455.
2. Collins L, Penny D. Complex spliceosomal organization ancestral to extant eukaryotes.
Mol Biol Evol . 2005;22(4):1053-1066.
3. Veretnik S, Wills C, Youkharibache P, Valas RE, Bourne PE. Sm/Lsm genes provide a
glimpse into the early evolution of the spliceosome. PLoS Comput Biol . 2009;5(3):
e1000315.
4. Fabrizio P, Dannenberg J, Dube P, et al. The evolutionarily conserved core design of
the catalytic activation step of the yeast spliceosome. Mol Cell . 2009;36(4):593-608.
5. Wahl MC, Will CL, L¨hrmann R. The spliceosome: design principles of a dynamic
RNP machine. Cell . 2009;136(4):701-718.
6. Belshaw R, Bensasson D. The rise and falls of introns. Heredity . 2006;96(3):208-213.
7. Rodr´guez-Trelles F, Tarr´o R, Ayala FJ. Origins and evolution of spliceosomal
introns. Annu Rev Genet . 2006;40:47-76.
8. Roy SW, Gilbert W. The evolution of spliceosomal introns: patterns, puzzles and pro-
gress. Nat Rev Genet . 2006;7(3):211-221.
9. Sharp PA. Five easy pieces. Science . 1991;254(5032):663.
10. Cech TR. The generality of self-splicing RNA: relationship to nuclear mRNA splic-
ing. Cell . 1986;44(2):207-210.
11. Sharp PA. On the origin of RNA splicing and introns. Cell . 1985;42(2):397-400.
12. Dayie KT, Padgett RA. A glimpse into the active site of a group II intron and maybe the
spliceosome, too. RNA . 2008;14(9):1697-1703.
13. Keating KS, Toor N, Perlman PS, Pyle AM. A structural analysis of the group II intron
active site and implications for the spliceosome. RNA . 2010;16(1):1-9.
14. Michel F, Costa M, Westhof E. The ribozyme core of group II introns: a structure in
want of partners. Trends Biochem Sci . 2009;34(4):189-199.
15. Valadkhan S. The spliceosome: a ribozyme at heart? Biol Chem . 2007;388(7):693-697.
16. Valadkhan S. Role of the snRNAs in spliceosomal active site. RNA Biol . 2010;
7(3):345-353.
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