Biology Reference
In-Depth Information
ACKNOWLEDGMENTS
We thank our coworkers and collaborators for many discussions on ribozyme mechanism,
especially Stephanie Kath-Schorr, Shinya Harusawa, and Joe Piccirilli, and Cancer
Research UK for financial support.
REFERENCES
1. Buzayan JM, GerlachWL, Bruening G. Non-enzymatic cleavage and ligation of RNAs
complementary to a plant virus satellite RNA. Nature . 1986;323:349-353.
2. Feldstein PA, Buzayan JM, Bruening G. Two sequences participating in the autolytic
processing of satellite tobacco ringspot virus complementaryRNA. Gene . 1989;82:53-61.
3. Hampel A, Tritz R. RNA catalytic properties of the minimum ( )sTRSV sequence.
Biochemistry . 1989;28:4929-4933.
4. Guo HC, De Abreu DM, Tillier ER, Saville BJ, Olive JE, Collins RA. Nucleotide
sequence requirements
for
self-cleavage of Neurospora VS RNA.
J Mol Biol .
1993;232:351-361.
5. Lilley DMJ, Eckstein F, eds. Ribozymes and RNA Catalysis . Cambridge: Royal Society
of Chemistry; 2008.
6. Winkler WC, Nahvi A, Roth A, Collins JA, Breaker RR. Control of gene expression
by a natural metabolite-responsive ribozyme. Nature . 2004;428:281-286.
7. Canny MD, Jucker FM, Kellogg E, Khvorova A, Jayasena SD, Pardi A. Fast cleavage
kinetics of a natural hammerhead ribozyme. J Am Chem Soc . 2004;126:10848-10849.
8. Zamel R, Poon A, Jaikaran D, et al. Exceptionally fast self-cleavage by a Neurospora
Varkud satellite ribozyme. Proc Natl Acad Sci USA . 2004;101:1467-1472.
9. Saville BJ, Collins RA. A site-specific self-cleavage reaction performed by a novel
RNA in Neurospora mitochondria. Cell . 1990;61:685-696.
10. Kennell JC, Saville BJ, Mohr S, et al. The VS catalytic RNA replicates by reverse tran-
scription as a satellite of a retroplasmid. Genes Dev . 1995;9:294-303.
11. Murchie AIH, Thomson JB, Walter F, Lilley DMJ. Folding of the hairpin ribozyme in
its natural conformation achieves close physical proximity of the loops. Mol Cell .
1998;1:873-881.
12. Walter F, Murchie AIH, Thomson JB, Lilley DMJ. Structure and activity of the hairpin
ribozyme in its natural
junction conformation; effect of metal
ions. Biochemistry .
1998;37:14195-14203.
13. Walter NG, Burke JM, Millar DP. Stability of hairpin ribozyme tertiary structure is
governed by the interdomain junction. Nat Struct Biol . 1999;6:544-549.
14. Berzal-Herranz A, Simpson J, Chowrira BM, Butcher SE, Burke JM. Essential nucle-
otide sequences and secondary structure elements of the hairpin ribozyme. EMBO J .
1993;12:2567-2574.
15. Butcher SE, Burke JM. Structure-mapping of the hairpin ribozyme—magnesium-
dependent folding and evidence for tertiary interactions within the ribozyme-substrate
complex. J Mol Biol . 1994;244:52-63.
16. Chowrira BM, Berzal-Herranz A, Burke JM. Ionic requirements for RNA binding,
cleavage, and ligation by the hairpin ribozyme. Biochemistry . 1993;32:1088-1095.
17. Chowrira BM, Berzal-Herranz A, Burke JM. Novel guanosine requirement for catal-
ysis by the hairpin ribozyme. Nature . 1991;354:320-322.
18. Chowrira BM, Burke JM. Binding and cleavage of nucleic acids by the “hairpin” ribo-
zyme. Biochemistry . 1991;30:8518-8522.
19. Beattie TL, Olive JE, Collins RA. A secondary-structure model for the self-cleaving
region of Neurospora VS RNA. Proc Natl Acad Sci USA . 1995;92:4686-4690.
 
 
Search WWH ::




Custom Search