Biology Reference
In-Depth Information
time in
Arabidopsis
.
Proceedings of the National Academy of Sciences of the United States of
America
,
108
, 3430-3435.
Pecinka, A., Dinh, H. Q., Baubec, T., Rosa, M., Lettner, N., & Mittelsten Scheid, O.
(2010). Epigenetic regulation of repetitive elements is attenuated by prolonged heat stress
in
Arabidopsis
.
The Plant Cell
,
22
, 3118-3129.
Petruk, S., Sedkov, Y., Johnston, D. M., Hodgson, J. W., Black, K. L., Kovermann, S. K.,
et al. (2012). TrxG and PcG proteins but not methylated histones remain associated with
DNA through replication.
Cell
,
150
, 922-933.
Phelps-Durr, T. L., Thomas, J., Vahab, P., & Timmermans, M. C. (2005). Maize rough
sheath2 and its
Arabidopsis
orthologue ASYMMETRIC LEAVES1 interact with HIRA,
a predicted histone chaperone, to maintain knox gene silencing and determinacy during
organogenesis.
The Plant Cell
,
17
, 2886-2898.
Pillot, M., Baroux, C., Vazquez, M. A., Autran, D., Leblanc, O., Vielle-Calzada, J. P., et al.
(2010). Embryo and endosperm inherit distinct chromatin and transcriptional states from
the female gametes in
Arabidopsis
.
The Plant Cell
,
22
, 307-320.
Pontier, D., Picart, C., Roudier, F., Garcia, D., Lahmy, S., Azevedo, J., et al. (2012). NERD,
a plant-specific GW protein, defines an additional RNAi-dependent chromatin-based
pathway in
Arabidopsis
.
Molecular Cell
,
48
, 121-132.
Reinders, J., Wulff, B. B., Mirouze, M., Mari-Ordonez, A., Dapp, M., Rozhon, W., et al.
(2009). Compromised stability of DNA methylation and transposon immobilization in
mosaic
Arabidopsis
epigenomes.
Genes & Development
,
23
, 939-950.
Richards, E. J. (2006). Inherited epigenetic variation—Revisiting soft inheritance.
Nature
Reviews. Genetics
,
7
, 395-401.
Richards, E. J. (2011). Natural epigenetic variation in plant species: A view from the field.
Current Opinion in Plant Biology
,
14
, 204-209.
Rinn, J. L., Kertesz, M., Wang, J. K., Squazzo, S. L., Xu, X., Brugmann, S. A., et al. (2007).
Functional demarcation of active and silent chromatin domains in human HOX loci by
noncoding RNAs.
Cell
,
129
, 1311-1323.
Rodriguez-Leal, D., & Vielle-Calzada, J. P. (2012). Regulation of apomixis: Learning from
sexual experience.
Current Opinion in Plant Biology
,
15
, 549-555.
Roudier, F., Ahmed, I., Berard, C., Sarazin, A., Mary-Huard, T., Cortijo, S., et al. (2011).
Integrative epigenomic mapping defines four main chromatin states in
Arabidopsis
.
The
EMBO Journal
,
30
, 1928-1938.
Satake, A., & Iwasa, Y. (2012). A stochastic model of chromatin modification: Cell popula-
tion coding of winter memory in plants.
Journal of Theoretical Biology
,
302
, 6-17.
Saze, H., & Kakutani, T. (2011). Differentiation of epigenetic modifications between trans-
posons and genes.
Current Opinion in Plant Biology
,
14
, 81-87.
Schmitz, R. J., Schultz, M. D., Lewsey, M. G., O'Malley, R. C., Urich, M. A., Libiger, O.,
et al. (2011). Transgenerational epigenetic instability is a source of novel methylation
variants.
Science
,
334
, 369-373.
Schmitz, R. J., Tamada, Y., Doyle, M. R., Zhang, X., & Amasino, R. M. (2009). Histone
H2B deubiquitination is required for transcriptional activation of FLOWERING
LOCUS C and for proper control of flowering in
Arabidopsis
.
Plant Physiology
,
149
,
1196-1204.
Schubert, D., Primavesi, L., Bishopp, A., Roberts, G., Doonan, J., Jenuwein, T., et al.
(2006). Silencing by plant Polycomb-group genes requires dispersed trimethylation of
histone H3 at lysine 27.
The EMBO Journal
,
25
, 4638-4649.
Schuettengruber, B., Chourrout, D., Vervoort, M., Leblanc, B., & Cavalli, G. (2007).
Genome regulation by polycomb and trithorax proteins.
Cell
,
128
, 735-745.
Schwartz, Y. B., Kahn, T. G., Nix, D. A., Li, X. Y., Bourgon, R., Biggin, M., et al. (2006).
Genome-wide analysis of Polycomb targets in Drosophila melanogaster.
Nature Genetics
,
38
, 700-705.
