Biology Reference
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Seo, H. C., Edvardsen, R. B., Maeland, A. D., Bjordal, M., Jensen, M. F., Hansen, A., et al.
(2004). Hox cluster disintegration with persistent anteroposterior order of expression in
Oikopleura dioica.
Nature
,
431
, 67-71.
Sessa, L., Breiling, A., Lavorgna, G., Silvestri, L., Casari, G., & Orlando, V. (2007). Non-
coding RNA synthesis and loss of Polycomb group repression accompanies the colinear
activation of the human HOXA cluster.
RNA
,
13
, 223-239.
Sexton, T., Yaffe, E., Kenigsberg, E., Bantignies, F., Leblanc, B., Hoichman, M., et al.
(2012). Three-dimensional folding and functional organization principles of the Dro-
sophila genome.
Cell
,
148
, 458-472.
Shen, Y., Yue, F., McCleary, D. F., Ye, Z., Edsall, L., Kuan, S., et al. (2012). A map of the
cis-regulatory sequences in the mouse genome.
Nature
,
488
, 116-120.
Simonis, M., Kooren, J., & de Laat, W. (2007). An evaluation of 3C-based methods to cap-
ture DNA interactions.
Nature Methods
,
4
, 895-901.
Sing, A., Pannell, D., Karaiskakis, A., Sturgeon, K., Djabali, M., Ellis, J., et al. (2009). A ver-
tebrate Polycomb response element governs segmentation of the posterior hindbrain.
Cell
,
138
, 885-897.
Smith, S. T., Petruk, S., Sedkov, Y., Cho, E., Tillib, S., Canaani, E., et al. (2004). Modu-
lation of heat shock gene expression by the TAC1 chromatin-modifying complex.
Nature Cell Biology
,
6
, 162-167.
Soshnikova, N., & Duboule, D. (2009). Epigenetic temporal control of mouse Hox genes in
vivo.
Science
,
324
, 1320-1323.
Spitz, F., Gonzalez, F., & Duboule, D. (2003). A global control region defines a chromo-
somal regulatory landscape containing the HoxD cluster.
Cell
,
113
, 405-417.
Spitz, F., Gonzalez, F., Peichel, C., Vogt, T. F., Duboule, D., & Zakany, J. (2001). Large
scale transgenic and cluster deletion analysis of the HoxD complex separate an ancestral
regulatory module from evolutionary innovations.
Genes &Development
,
15
, 2209-2214.
Spitz, F., Herkenne, C., Morris, M. A., &Duboule, D. (2005). Inversion-induced disruption
of the Hoxd cluster leads to the partition of regulatory landscapes.
Nature Genetics
,
37
,
889-893.
Struhl, G. (1981). A homoeotic mutation transforming leg to antenna in Drosophila.
Nature
,
292
, 635-638.
Tarchini, B., & Duboule, D. (2006). Control of Hoxd genes' collinearity during early limb
development.
Developmental Cell
,
10
, 93-103.
Tavares, L., Dimitrova, E., Oxley, D., Webster, J., Poot, R., Demmers, J., et al. (2012).
RYBP-PRC1 complexes mediate H2A ubiquitylation at polycomb target sites indepen-
dently of PRC2 and H3K27me3.
Cell
,
148
, 664-678.
Tillib, S., Petruk, S., Sedkov, Y., Kuzin, A., Fujioka, M., Goto, T., et al. (1999). Trithorax-
and Polycomb-group response elements within an Ultrabithorax transcription mainte-
nance unit consist of closely situated but separable sequences.
Molecular and Cellular
Biology
,
19
, 5189-5202.
Tolhuis, B., Blom, M., Kerkhoven, R. M., Pagie, L., Teunissen, H., Nieuwland, M., et al.
(2011). Interactions among Polycomb domains are guided by chromosome architecture.
PLoS Genetics
,
7
, e1001343.
Tschopp, P., & Duboule, D. (2011). A regulatory 'landscape effect' over the HoxD cluster.
Developmental Biology
,
351
, 288-296.
Tschopp, P., Tarchini, B., Spitz, F., Zakany, J., & Duboule, D. (2009). Uncoupling time
and space in the collinear regulation of Hox genes.
PLoS Genetics
,
5
, e1000398.
van der Lugt, N. M., Alkema, M., Berns, A., & Deschamps, J. (1996). The Polycomb-group
homolog Bmi-1 is a regulator of murine Hox gene expression.
Mechanisms of Develop-
ment
,
58
, 153-164.
van Steensel, B., & Dekker, J. (2010). Genomics tools for unraveling chromosome architec-
ture.
Nature Biotechnology
,
28
, 1089-1095.
