Biology Reference
In-Depth Information
Genes/pathways
(upregulated, downregulated)
Stages a , conditions
Tissue/species
No. of genes
Platform
References
Whole body/
X. laevis
NF46, 14 h,
188 up, 249 down
in T3
Cell communication,
transcription, protein
degradation-dependent
signaling, cell cycle, cell
differentiation , cytoskeletal
biogenesis , cell division
Agilent oligoarray,
21,495
Unigene
clusters
Das et al.
(2009)
100 nM T3,
CHX
versus control
þ
cycloheximide
Whole body/
X. laevis
400 ppb atrazine
from NF43-NF62
44 in males, 44 in
females
Ketone body metabolism, urea
cycle, amino acid metabolism,
glycolysis/gluconeogenesis , fatty
acid elongation
Affymetrix, 14,400
elements
Langerveld
et al. (2009) ,
Zaya et al.
(2011)
Whole body/
Bufo marinus
G29/30, 33/34, 38/
40, 40-41, 42/43,
46
871 total; 20 up,
17 down in G46
versus G42
Induced during
metamorphosis: hemoglobin a ,
b , harderin-like,
apolipoprotein A1, g -
crystallin, serum albumin,
gastrokine, trefoil factor,
olfactomedin
cDNA array—
5170 random
cDNAs from
toadlet library
Halliday et al.
(2008)
MAGEX cDNA b ,
420 cDNAs
Tail/ X. laevis
NF47, 52, 56, 58,
60, 62
77 genes,
13 clusters
Transcription, metabolism,
apoptosis, signal transduction,
transport/binding
Veldhoen
et al. (2002)
MAGEX cDNA b ,
401 cDNAs
Tail/ Rana
catesbiana
G31-33 tail tips,
10 nM T3, 0, 1,
2 days
92 genes
PCNA , K-ras, caspase 6,
Na/dicarboxylate transporter,
transcription, intracellular
signaling, cell fate
determination
Veldhoen
et al. (2006)
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