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Das, B., Cai, L., Carter, M. G., Piao, Y.-L., Sharov, A. A., Ko, M. S. H., et al. (2006). Gene
expression changes at metamorphosis induced by thyroid hormone in Xenopus laevis
tadpoles. Developmental Biology , 291 , 342-355.
Das, B., Heimeier, R. A., Buchholz, D. R., & Shi, Y.-B. (2009). Identification of direct thy-
roid hormone response genes reveals the earliest gene regulation programs during frog
metamorphosis. The Journal of Biological Chemistry , 284 , 34167-34178.
Dekker, J., Rippe, K., Dekker, M., & Kleckner, N. (2002). Capturing chromosome confor-
mation. Science , 295 , 1306-1311.
de Wit, E., & de Laat, W. (2012). A decade of 3C technologies: Insights into nuclear orga-
nization. Genes & Development , 26 , 11-24.
Desvergne, B. (1994). How do thyroid hormone receptors bind to structurally diverse
response elements? Molecular and Cellular Endocrinology , 100 , 125-131.
Eliceiri, B., & Brown, D. D. (1994). Quantitation of endogenous thyroid-hormone
receptor-alpha
and receptor-beta during embryogenesis
and metamorphosis
in
Xenopus-laevis. The Journal of Biological Chemistry , 269 , 24459-24465.
Fairclough, L., & Tata, J. R. (1997). An immunocytochemical analysis of the expression of
thyroid hormone receptor alpha and beta proteins during natural and thyroid hormone-
induced metamorphosis in Xenopus. Development, Growth & Differentiation , 39 , 273-283.
Flamant, F., Gauthier, K., & Samarut, J. (2007). Thyroid hormones signaling is getting more
complex: STORMs are coming. Molecular Endocrinology , 21 , 321-333.
Flicek, P., Amode, M. R., Barrell, D., Beal, K., Brent, S., Carvalho-Silva, D., et al. (2012).
Ensembl 2012. Nucleic Acids Research , 40 , D84-D90.
Fullwood, M. J., & Ruan, Y. (2009). ChIP-based methods for the identification of long-
range chromatin interactions. Journal of Cellular Biochemistry , 107 , 30-39.
Fullwood, M. J., Liu, M. H., Pan, Y. F., Liu, J., Xu, H., Mohamed, Y. B., et al. (2009). An
oestrogen-receptor-alpha-bound human chromatin interactome. Nature , 462 , 58-64.
Fullwood, M. J., Wei, C.-L. C., Liu, E. T. E., & Ruan, Y. (2009). Next-generation DNA
sequencing of paired-end tags (PET) for transcriptome and genome analyses. Genome
Research , 19 , 521-532.
Furlow, J. D., & Brown, D. D. (1999). In vitro and in vivo analysis of the regulation of a
transcription factor gene by thyroid hormone during Xenopus laevis metamorphosis.
Molecular Endocrinology , 13 , 2076-2089.
Garber, M., Grabherr, M. G., Guttman, M., & Trapnell, C. (2011). Computational methods
for transcriptome annotation and quantification using RNA-seq. Nature Methods , 8 ,
469-477.
Gilchrist, M. J. (2012). From expression cloning to gene modeling: The development of
Xenopus gene sequence resources. Genesis , 50 , 143-154.
Grimaldi, A., Buisine, N., Miller, T., Shi, Y.-B., & Sachs, L. M. (2012). Mechanisms of thy-
roid hormone receptor action during development: Lessons from amphibian studies.
Biochimica et Biophysica Acta . http://dx.doi.org/10.1016/j.bbagen.2012.04.020 .
Gronemeyer, H., & Laudet, V. (1995). Transcription factors 3: Nuclear receptors. Protein
Profile , 2 , 1173-1308.
Hamza, M. S., Pott, S., Vega, V. B., Thomsen, J. S., Kandhadayar, G. S., Ng, P. W. P., et al.
(2009). De-novo identification of PPARgamma/RXR binding sites and direct targets
during adipogenesis. PloS One , 4 , e4907.
Handoko, L., Xu, H., Li, G., Ngan, C. Y., Chew, E., Schnapp, M., et al. (2011). CTCF-
mediated functional chromatin interactome in pluripotent cells. Nature Genetics , 43 ,
630-638.
Havis, E., Le Mevel, S., Morvan Dubois, G., Shi, D.-L., Scanlan, T. S., Demeneix, B. A.,
et al. (2006). Unliganded thyroid hormone receptor is essential for Xenopus laevis eye
development. The EMBO Journal , 25 , 4943-4951.
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