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Fig. 2. Phylogenetic tree of poplar laccases whole gene family. All laccases genes
were identified on the basis of laccases homologs annotation available from Phyto-
zome database (
Goodstein et al., 2011
). The phylogenetic tree was built using the web
service tool developed by
Dereeper et al. (2008)
. R, X, and O letters refer to poplar
genes highly expressed in roots, stem xylem, and other tissues, respectively. Star: no
expression data on efp Browser for these gene models; triangle: arabidopsis laccases
from group A, expressed in stem; double circle: predicted gene targets for miR397a.
Arabidopsis gene names are underlined. The tree image was produced using iTOL
software (
Letunic and Bork, 2007
). AtLAC1: AT1G18140; AtLAC2: AT2G29130;
AtLAC3: AT2G30210; AtLAC4: AT2G38080; AtLAC5: AT2G40370; AtLAC6:
AT2G46570; AtLAC7: AT3G09220; AtLAC8: AT5G01040; AtLAC9: AT5G01050;
AtLAC10: AT5G01190; AtLAC11: AT5G03260; AtLAC12: AT5G05390; AtLAC13:
AT5G07130; AtLAC14: AT5G09360; AtLAC15: AT5G48100; AtLAC16:
AT5G58910; AtLAC17: AT5G60020. PtrLAC1: POPTR_0001s14010; PtrLAC2:
POPTR_0001s18500; PtrLAC3: POPTR_0001s21380; PtrLAC4: POPTR_0001s25580;
PtrLAC5: POPTR_0001s35740; PtrLAC6: POPTR_0001s41160; PtrLAC7: POPTR_
0001s41170; PtrLAC8: POPTR_0004s16370; PtrLAC9: POPTR_0005s22230;
PtrLAC10: POPTR_0005s22240; PtrLAC11: POPTR_0005s22250; PtrLAC12:
POPTR_0006s08740; PtrLAC13: POPTR_0006s08780; PtrLAC14: POPTR_
0006s09520; PtrLAC15: POPTR_0006s09830; PtrLAC16: POPTR_0006s09840;
