Biomedical Engineering Reference
In-Depth Information
Consider an enzyme catalyzed reaction between a substrate,
S
, modifier,
M,
and enzyme,
, synthesizing product,
,as
E
P
ð
8
:
124
Þ
are the intermediate complexes. 6 Note that we
have eliminated the reverse reaction from the product to the intermediate complex. Another
variation of allosteric reaction eliminates the product from forming through
where
C
¼ SE
,
C
¼ ME
, and
C
¼ SME
1
2
3
C
:
3
The equations that describe the system in Eq. (8.124) are
q S ¼ K 1
q C 1 þ K 4
q C 3 K
q S q E K
q S q C 2
1
4
q M ¼ K 3
q C 2 þ K 6
q C 3 K
q M q E K
q M q C 1
3
6
q C 1 ¼ K
q S q E þ K 6
q C 3 K 1
ð
þ K
Þ q C 1 K
q M q C 1
1
2
6
ð
8
:
125
Þ
q C 2 ¼ K 3 q M q E þ K 4 þ K 5
ð
Þ q C 3 K 3 q C 2 K 4 q S q C 2
q C 3 ¼ K
q S q C 2 þ K
q M q C 1 K 4
ð
þ K
þ K 6
Þ q C 3
4
6
5
q P ¼ K 2 q C 1 þ K 5 q C 3
We eliminate
q E
from Eq. (8.125) by using
q E ¼ E 0 q C 1 q C 2 q C 3 , giving
q S ¼ K 1 þ K 1 q S
ð
Þ q C 1 þ K 4 þ K 1 q S
ð
Þ q C 3 K 1 q S E 0 K 4 K 1
ð
Þ q S q C 2
q M ¼ K 3 þ K 3 q M
ð
Þ q C 2 þ K 6 þ K 3 q M
ð
Þ q C 3 K 3 q M E 0 K 6 K 3
ð
Þ q M q C 1
q C 1 ¼ K
q S E
K
q S q C 2 þ K 6
ð
K
q S
Þ q C 3 K 1
ð
þ K
þ K
q M þ K
q S
Þ q C 1
1
0
1
1
2
6
1
ð
8
:
126
Þ
q C 2 ¼ K
q M E
K
3
q M q C 1 þ K 4
ð
þ K
K
3
q M
Þ q C 3 K
ð
q M þ K 3
þ K
q S
Þ q C 2
3
0
5
3
4
q C 3 ¼ K 4 q S q C 2 þ K 6 q M q C 1 K 4 þ K 5 þ K 6
ð
Þ q C 3
q P ¼ K
q C 1 þ K
q C 3
2
5
with nonzero initial conditions of
q S ð
0
Þ¼ S
0 ,
q M ð
0
Þ¼ M
0 , and
q E ð
0
Þ¼ E
:
0
6 This model is adapted from Rubinow, page 89.
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