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the control region, but presenting no haplotype sharing between both regions. The haplotypic
diversity is 0.479 ± 0.072 and the nucleotide diversity is 0.00042, a low value suggesting a
short period of separation.
Table 1. Absolute haplotype frequencies, and gene (Nei 1978) and nucleotide (Tamura &
Nei 1993) diversities for the Brazilian subpopulations using the control region data.
Population
Haplo types
Nucleotide
diversity ()
Gene
diversity ( h)
n
BrA
BrB
BrC
BrD
BrE
BrF
0.7455
+/- 0.0978
0.0024
+/- 0.0019
Mamirauá
11
3
0
5
1
0
2
0.4167
+/- 0.1907
0.0031
+/- 0.0024
Tefé
9
0
7
1
0
1
0
CO3
CO3
CO2
CO2
BA4
BA4
CO4
CO4
BA1
BA1
BA6
BA6
BA2
BA2
BA7
BA7
BA3
BA3
CA2
CA2
CO1
CO1
F
F
CO5
CO5
C
C
D
D
CA1
CA1
A
A
E
E
B
B
Figure 2. Median joining network (Bandelt et al., 1999) constructed with control region mtDNA
haplotypes for I. geoffrensis individuals from four populations, including two subpopulations from
Brazil. Circle areas are proportional to haplotype frequencies and branch lengths are proportional to
mutation events. Haplotypes are from the Brazilian Amazon (BR, A-F), Bolivian Amazon (BA),
Colombian Orinoco (CO) and Colombian Amazon (CA) populations. BA1 = BA5 (Banguera-
Hinestroza et al., 2002).
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