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heterocyst differentiation in
Anabena
sp. strain PCC 7120 after a nitrogen shift-down. Subsequently,
this has been confi rmed in case of
N
.
muscorum
and
A
.
variabilis
ATCC 29413 where the expression
of
hupSL
occurred about 24 h after nitrogen step-down and it has been suggested to be regulated at
the transcriptional level (Axelsson
et al
., 1999; Happe
et al
., 2000). A tsp is located 259 bp upstream of
hupS
start codon of
N
.
muscorum
(Happe
et al
., 2000; Lindberg
et al
., 2000).
A
.
variabilis
ATCC 29413
lacks the 10.5 kb element interrupting
hupL
gene and the
hupSL
genes were transcribed as a single
operon. The presence of a tsp at 103 bp upstream of 5'-end of the transcript and a Fnr (fumarate
nitrate reductase regulator) binding site are the characteristic features of transcripts. The functional
nature of the HupSL has been assessed by the isolation of a
hupSL
disruptant mutant that could not
reoxidize the H
2
evolved during nitrogen fi xation, as a result of which the mutant evolved three
times more H
2
than the wild-type. A transcriptional analysis of hydrogenase genes in
A
.
variabilis
ATCC 29413 revealed that the
hupL
gene transcripts appeared both in heterocysts and vegetative
cells and in vegetative cells of the ammonium grown organism (Boison
et al
., 2000). Axelsson and
Lindblad (2002) found that the transcriptional activity of
hupSL
genes in case of
N
.
muscorum
and
N. punctiforme
ATCC 29133 were enhanced in response to the addition of 9% H
2
in air that coincided
with enhanced uptake hydrogenase activity. A low level of oxygen and addition of nickel also
enhanced the
hupSL
transcript levels thus confi rming the earlier studies made on uptake hydrogenase
activity in case of
Anabaena
sp. strains CA and IF (Xiankong
et al
., 1984),
A
.
cylindrica
(Houchins
and Burris, 1981b; Daday
et al
., 1985),
Oscillatoria subbrevis
strain 111 (Kumar and Polasa, 1991) and
N. punctiforme
ATCC 29133 (Oxelfelt
et al
., 1995). In aerobically grown
L
.
majuscula
CCAP 1446/4
nitrogen fi xation with concomitant synthesis of HupL protein occurred in the dark phase. There
was an apparent HupL turnover with its degradation in the light phase and synthesis in the dark
phase emphasizing a correlation between nitrogen fi xation and uptake hydrogenase activity (Leitäo
et al
., 2005). The presence of putative NtcA-binding sites in the
hupSL
promoter of the heterocystous
cyanobacteria such as
Nostoc
PCC 7422 (Yoshino
et al
., 2007),
A
.
variabilis
ATCC 29413 (427 bp upstream
of tsp of hupS; Weyman
et al
., 2008) and in the non-heterocystous cyanobacteria
L
.
majuscula
CCP
1446/4 (in between 240 and 227 bp upstream of tsp of hupS; Leitão
et al
., 2005) and
Gloeothece
sp.
ATCC 27152 (238 bp upstream of tsp of
hupS
; Oliveira
et al
., 2004) has been demonstrated. Holmqvist
et al
. (2009) identifi ed the NtcA-binding site at -258.5 bp (upstream) to tsp in the promoter of
hupSL
of
N
.
punctiforme
ATCC 29133. The removal of NtcA-binding site has no effect on the expression of
hupSL
gene as truncated versions of the
hupSL
promoter without the NtcA-binding site as short as
-57 bp to tsp could elicit the expression of either
gfp
or
luxAB
as reporter genes. They suggested
that heterocyst-specifi c expression of the
hupSL
genes reside in this short promoter region or in
the downstream untranslated leader sequence. The
hupSL
genes with the probable location of the
maturation genes in relation to
hyp
-gene cluster in various fi lamentous heterocystous and non-
heterocystous cyanobacteria have been presented (Fig. 12).
Transcriptional analysis of
hoxEFUYH
genes, encoding the bidirectional hydrogenase, in
Anabaena
sp. strain PCC 7120 showed that the transcripts appeared as two units because
hoxEF
and
hoxUYH
are separated by a distance of 8.8 kb. However, along with
hoxEF
an ORF
alr0750
also was transcribed
and similarly,
hoxUYH
transcript consisted of two other ORFs,
alr0763
and
alr0765
. Two tsps, one
occurring at 66 bp upstream of
alr0750
and the other at 57 bp upstream of
hoxU
have been identifi ed.
Specifi c interactions between LexA and NtcA lead to a transcriptional regulation of
hox
genes and
the binding of these transcriptional regulators to the
hox
promoter region has been confi rmed by
electrophoretic mobility shift assays (Sjoholm
et al
., 2007).