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required for mutual regulation of
ntcA
and
hetR
. Although
prpJ2
is nonessential for diazotrophic
growth, a double mutant for
prpJ1prpJ2
was unable to grow diazotrophically and resembled in its
properties with the S20 mutant of
prpJ1
. The double mutant showed decreased transcripts for
ntcA
and
hetR
and accordingly the proteins NtcA and HetR when compared to the wild-type after a
nitrogen step-down. A consensus NtcA-binding site (GTAGCCACAGGTAC) upstream of tsp in the
promoter region of
prpJ2
has been recognized and a change in this sequence to CCGGCCACAGGCA
resulted in a loss of NtcA-binding. This emphasizes the role of NtcA in regulating the expression of
prpJ2
. Another signifi cant feature is the absence of induction of
prpJ2
in a
hetR
mutant. A nitrogen
responsive regulator, NrrA encoded by
nrrA
(ORF
all4312
) has been described by Ehira and Ohmori
(2006a). The expression of
nrrA
in the
prpJ1prpJ2
double mutant was unaffected so also the expression
of
prpJ2
remained unaffected in a
nrrA
mutant. Taking these into consideration, Jang
et al
. (2009)
concluded that for interaction of NtcA and HetR, the presence of PrpJ1 and PrpJ2 is required.
Direct regulation of heterocyst differentiation by HetR in
Anabaena
sp. strain PCC 7120 has
been also determined by an epistasis analysis conducted by Orozco
et al
. (2006). They created a
hetR
null mutant (UHM103) that showed a Het
-
phenotype under all conditions tested and UHM103 is
identical to the previously described
hetR
-
mutants (Buikema and Haselkorn, 1991b; Black
et al
.,
1993; Dong
et al
., 2000). By utilizing UHM103, they produced double mutants, i.e.
hetR
-
patA
-
,
hetR
-
hetN
-
and
hetR
-
patS
-
which also showed a Het
-
phenotype identical to UHM103. This confi rms that
HetR directly regulates heterocyst differentiation and inactivation of
hetR
leads to epistatic effect on
the genes tested. Risser and Callahan (2007) employed error-prone PCR amplifi cation procedure for
introducing mutations in the promoter and coding sequence of
hetR
of
Anabaena
sp. strain PCC 7120
and introduced the mutated
hetR
gene sequences into UHM103 in a het
-
background by conjugation.
The exconjugants selected were further characterized for their growth and heterocyst differentiation
in a nitrogen-defi cient medium. Thirty-three mutants having amino acid substitutions from residue
33 to 150 at N-terminus of the HetR were unable to survive nitrogen deprivation and differed in
heterocyst frequencies to less than 2%. Out of three amino acid substitutions in
hetR
gene, i.e
hetR
Cys48Ala
,
hetR
Ser152Ala
and
hetR
Ser179Asn
, Risser and Callahan (2007) showed that
hetR
Ser152Ala
and
hetR
Cys48Ala
gene
sequences on a plasmid could complement the mutant UHM103, restoring the heterocyst frequencies
almost at par with that of the wild-type. This shows that these two amino acid residues Cys48 and
Ser152 are not essential for heterocyst differentiation, in contrast to their essentiality reported earlier
(Dong
et al
., 2000; Huang
et al
., 2004). Similarly, mutant 216 of
Anabaena
sp. strain PCC 7120 that
had a mutation in
hetR
Ser179Asn
(Dong
et al
., 2000; Huang
et al
., 2004) did not differentiate heterocysts
and in the experiments of Risser and Callahan (2007)
hetR
Ser179Asn
did not complement UHM103.
Mutants with amino acid substitutions
hetR
Asp17Glu
and
hetR
Gly36Ala
caused a Het
-
phenotype whereas
hetR
His69Tyr
substitution resulted in heterocyst differentiation to less than 0.1% of cells. These three
amino acid substitutions were found to be essential for normal heterocyst differentiation and levels
of HetR turnover. The other important fi ndings are that (i) Residue Asp17 of HetR is important
for DNA-binding activity but not Cys48 of HetR as has been reported earlier for this activity by
Huang
et al
. (2004); (ii) the amino acid substitution in
hetR
Cya48Ala
prevented the formation of HetR
homodimer formation, thus confi rming the earlier observations of Huang
et al
. (2004) and HetR
homodiner formation has been observed in the wild-type, and other HetR amino acid substitutions
such as HetR
Asp17Glu
, HetR
Gly36Ala
and HetR
His69Tyr
;
(iii) replacement of 2 bp in the
hetR
coding
region in the wild-type of
Anabaena
sp. strain PCC 7120 to cause a Cys48Ala substitution did
not affect heterocyst differentiation; (iv) the wild-type HetR protein and the recombinant proteins
produced (in respect of the amino acid substitutions in
hetR
mentioned in this study) in the
experiments of Risser and Callahan (2007) were all devoid of the protease activity and accordingly