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Vallenet, D., Labarre, L., Rouy, Z., Barbe, V., Bocs, S., Cruveiller, S., Lajus, A., Pascal, G., Scarpelli, C., and Medigue, C. (2006)
MaGe: A microbial genome annotation system supported by synteny results.
Nucleic Acids Res
34:
53-65.
Veal, E. A., Findlay, V. J, Day, A. M, Bozonet, S. M., Evans, J. M., Quinn, J., Morgan, .BA. (2004) A 2-Cys peroxiredoxin regulates
peroxide-induced oxidation and activation of a stress-activated MAP kinase.
Mol Cell
15:
129-139.
Wang, L-S., Warnow, T., Moret, B., Jansen, R., and Raubeson, L. (2006) Distance-based genome rearrangement phylogeny.
J
Mol Evol
63:
473-483.
Ward, D. M., Cohan, F. M., Bhaya, D., Heidelberg, J. F., Kühl, M., and Grossman, A., (2008) Genomics, environmental genomics
and the issue of microbial species.
Heredity
100:
207-219. doi:10.1038/sj.hdy.6801011
Waterbury, J.B. and Rippka, R. (1989) Order
Chroococcales
Wettstein 1924, emend. Rippka et al. 1979. In: Staley, J. T., Bryant, M.
P., Pfenning, N., and Holt, J. G. (Eds.),
Bergey's Manual of Systematic Bacteriology
, vol. 3. Williams & Wilkins, Baltimore,
USA pp. 1728-1746.
Welsh, E. A., Liberton, M., Stöckel, J., Loh, T., Elvitigalo, T., Wang, C., Wollman, A., Fulton, R. S., Clifton, S. W., Jacobs, J. M.,
Aurora, R., Ghosh, B. K., Sherman, L. A., Smith, R. D., Wilson, R. K., and Pakrasi, H. B. (2008) The genome of
Cyanothece
51142, a unicellular diazotrophic cyanobacterium important in the marine nitrogen cycle.
Proc Natl Acad Sci USA
105:
15094-15099. doi:1073/pnas.0805418105
Wood, Z. A., Poole, L. B., and Karplus, P. A. (2003a) Peroxiredoxin evolution and the regulation of hydrogen peroxide
signaling.
Science
300:
650-653.
Wood, Z. A., Schroder, E., Robin Harris, J., and Poole, L. B. (2003b) Structure, mechanism and regulation of peroxiredoxins.
Trends Biochem Sci
28:
32-40.
Wu, J., Zhao, F., Wang, S., Deng, G., Wang, J., Bai, J., Lu, J., Qu, J., and Bao, Q. (2007) cTF: A database for comparative genomics
for transcription factors in cyanobacteria.
BMC Genomics
8:
104. doi:10.1186/1471-2164-8-104.
Xu, M., and Su, Z. (2009) Computational prediction of cAMP receptor (CRP) binding sites in cyanobacterial genomes.
BMC
Genomics
10:
23. doi:10.1186/1471-2164-10-23
Yang, Y., Qin, S., Zhao, F., Chi, X., and Zhang, X. (2007) Comparison of envelope-related genes in unicellular and fi lamentous
cyanobacteria.
Comp Funct Genomics
2007
. doi:10.1155/2007/25751
Zhang, X., Zhao, F., Guan, X., Yang, Y., Liang, C., and Qin, S. (2007) Genome-wide survey of putative serine/threonine protein
kinases in cyanobacteria.
BMC Genomics
8:
395. doi:10.1186/1471-2164-8-395
Zheng, Y., Szustakowski, J. D., Fortnow, L., Roberts, R. J., and Kasif, S. (2002) Computational identifi cation of operons in
microbial genomes.
Genome Res
12:
1221-1230.
Zuker, M. (2003) Mfold web server for nucleic acid folding and hybridization prediction.
Nucleic Acids Res
31:
3406-3415.