Biomedical Engineering Reference
In-Depth Information
Morimoto,.J.,.Hayashi,.Y.,.Iwasaki,.K.,.and.Suga,.H..(2011)..Flexizymes:.Their.evolutionary.history.
and.the.origin.of.catalytic.function.. Accounts of Chemical Research 44 ,.1359-1368.
Murakami,.H.,.Ohta,.A.,.Ashigai,.H.,.and.Suga,.H..(2006)..A.highly.lexible.tRNA.acylation.method.
for.non-natural.polypeptide.synthesis.. Nature Methods 3 ,.357-359.
Murakami,. H.,. Saito,. H.,. and. Suga,. H.. (2003)..A. versatile. tRNA. aminoacylation. catalyst. based. on.
RNA.. Chemistry and Biology 10 ,.655-662.
Murphy,.P.M.,.Bolduc,.J.M.,.Gallaher,.J.L.,.Stoddard,.B.L.,.and.Baker,.D..(2009)..Alteration.of.enzyme.
speciicity.by.computational.loop.remodeling.and.design.. Proceedings of the National Academy of
Sciences of the United States of America 106 ,.9215-9220.
Nam,. K.T.,. Shelby,. S.A.,. Choi,. P.H.,. Marciel,. A.B.,. Chen,. R.,. Tan,. L.,. Chu,. T.K.. et. al.. (2010).. Free-
loating. ultrathin. two-dimensional. crystals. from. sequence-speciic. peptoid. polymers.. Nature
Materials 9 ,.1-7.
Nanda,.V..and.DeGrado,.W.F..(2006)..Computational.design.of.heterochiral.peptides.against.a.helical.
target.. Journal of the American Chemical Society 128 ,.809-816.
Neumann,.H.,.Wang,.K.,.Davis,.L.,.Garcia-Alai,.M.,.and.Chin,.J.W..(2010)..Encoding.multiple.unnatu-
ral.amino.acids.via.evolution.of.a.quadruplet-decoding.ribosome.. Nature 1 ,.4-7.
Nevinsky,. G.A.,. Favorova,. O.O.,. and. Buneva,. V.N.. (2002).. Natural. catalytic. antibodies:. New.
characters.in.the.protein.repertoire..In. Protein-Protein Interactions: A Molecular Cloning Manual ,.
E..Golemis,.ed..(Cold.Spring.Harbor,.NY:.Cold.Spring.Harbor.Laboratory.Press),.pp..523-534.
Niwa,. N.,. Yamagishi,. Y.,. Murakami,. H.,. and. Suga,. H.. (2009)..A. lexizyme. that. selectively. charges.
amino. acids. activated. by. a. water-friendly. leaving. group.. Bioorganic and Medicinal Chemistry
Letters 19 ,.3892-3894.
Ohta,.A.,.Murakami,.H.,.Higashimura,.E.,.and.Suga,.H..(2007)..Synthesis.of.polyester.by.means.of.
genetic.code.reprogramming.. Chemistry and Biology 14 ,.1315-1322.
Otey,.C.R.,.Landwehr,.M.,.Endelman,.J.B.,.Hiraga,.K.,.Bloom,.J.D.,.and.Arnold,.F.H..(2006)..Structure-
guided.recombination.creates.an.artiicial.family.of.cytochromes.P450.. PLoS Biology 4 ,.e112.
Park,.H.-S.,.Nam,.S.-H.,.Lee,.J.K.,.Yoon,.C.N.,.Mannervik,.B.,.Benkovic,.S.J.,.and.Kim,.H.-S..(2006)..Design.
and.evolution.of.new.catalytic.activity.with.an.existing.protein.scaffold.. Science 311 ,.535-538.
Patel,. S.C.,. Bradley,. L.H.,. Jinadasa,. S.P.,. and. Hecht,. M.H.. (2009).. Cofactor. binding. and. enzymatic.
activity. in. an. unevolved. superfamily. of. de. novo. designed. 4-helix. bundle. proteins.. Protein
Science: A Publication of the Protein Society 18 ,.1388-1400.
Pitt,.J.N..and.Ferre-D'Amare,.A.R..(2010)..Rapid.construction.of.empirical.RNA.itness.landscapes..
Science 330 ,.376-379.
Pollack,.S.J.,.Jacobs,.J.W.,.and.Schultz,.P.G..(1986)..Selective.chemical.catalysis.by.an.antibody.. Science
234 ,.1570-1573.
Porter,.E.A.,.Weisblum,.B.,.and.Gellman,.S.H..(2002)..Mimicry.of.host-defense.peptides.by.unnatural.
oligomers:.Antimicrobial.beta-peptides.. Journal of the American Chemical Society 124 ,.7324-7330.
Qiu,.J.X.,.Petersson,.E.J.,.Matthews,.E.E.,.and.Schepartz,.A..(2006)..Toward.beta-amino.acid.proteins:.
A. cooperatively. folded. beta-peptide. quaternary. structure.. Journal of the American Chemical
Society 128 ,.11338-11339.
Ragsdale,.S.W..(2006)..Metals.and.their.scaffolds.to.promote.dificult.enzymatic.reactions.. Chemical
Reviews 106 ,.3317-3337.
Richter,.F.,.Leaver-Fay,.A.,.Khare,.S.D.,.Bjelic,.S.,.and.Baker,.D..(2011)..De.novo.enzyme.design.using.
Rosetta3.. PLoS ONE 6 ,.e19230.
Robertson,. M.P.. and. Ellington,.A.D.. (1999).. In. vitro. selection. of. an. allosteric. ribozyme. that. trans-
duces.analytes.to.amplicons.. Nature Biotechnology 17 ,.62-66.
Robertson,.D.L..and.Joyce,.G.F..(1990)..Selection.in.vitro.of.an.RNA.enzyme.that.speciically.cleaves.
single-stranded.DNA.. Nature 344 ,.467-468.
Robertson,.M.P..and.Scott,.W.G..(2007)..The.structural.basis.of.ribozyme-catalyzed.RNA.assembly..
Science 315 ,.1549-1553.
Rodriguez-Granillo,.A.,.Annavarapu,.S.,.Zhang,.L.,.Koder,.R.L.,.and.Nanda,.V..(2011)..Computational.
design.of.thermostabilizing.d-amino.acid.substitutions.. Journal of the American Chemical Society
133 ,.18750-18759.
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