Chemistry Reference
In-Depth Information
43.
Saretzki , G. ; von Zglinicki , T. ; Replicative aging, telomeres and oxidative stress ;
Ann. N.Y.
Acad. Sci.
, 2002 ,
959
, 24 - 29 .
Kawanishi , S. ; Hiraku , Y. ; Oikawa , S. ; Mechanism of guanine - specifi c DNA damage by
oxidative stress and its role in carcinogenesis and aging;
Mutant. Res.
, 2001 ,
488
, 65 - 76 .
Abrescia , N.G.A. ; Malinina , L. ; Fernandez , L.G. ; Huybh - Dinh , T. ; Neidle , S. ; Subirana ,
J.A.; Structure of the oligonucleotide d(CGTATAATACG) as a site- specifi c complex with
nickel ions;
Nucl. Acid. Res.
, 1999 ,
27
, 1593 - 1599 .
Abrescia , N.G.A. ; Huybh - Dinh , T. ; Subirana , J.A. ; Nickel - guanine interactions in DNA:
crystal structure of nickel- d[CGTGTACACG]2 ;
J. Biol. Inorg. Chem.
, 2002 ,
7
, 195 - 199 .
Emwas , A.H.M. ; Sletten , E. ; NMR studies of interaction between Cu
2+
and Cu(en)
2
with
the Dickerson-Drew duplex [d(CGCGAATTCGCG)]
2
. Manuscript (to be published).
Oikawa , S. ; Kawanishi , S. ; Site - specifi c DNA damage at GGG sequences by oxidative
stress may accelerate telomere shortening;
FEBS Lett.
, 1999 ,
453
, 365 - 368 .
Jia , X. ; Zon , G. ; Marzilli , L.G. ; Multinuclear NMR investigation of zinc(2+) binding to a
dodecamer oligodeoxyribonucleotide: insights from carbon- 13 NMR spectroscopy ;
Inorg.
Chem.
, 1991 ,
30
, 228 - 239 .
Fichtinger - Schepman , A.M. ; Van der Veer , J.L. ; den Hartog , J.H.J. ; Reedijk , J. ; Adducts of
the antitumor drug cis-diamminedichloroplatinum(II) with DNA: formation, identifi ca-
tion, and quantitation;
Biochemistry
, 1985 ,
24
, 707 - 713 .
Legendre , F. ; Monjardet - Bas , V. ; Kozelka , J. ; Chottard , J.C. ; A complete kinetic study of
GG versus AG platination suggests that the doubly aquated derivatives of cisplatin are
the actual DNA binding species;
Chem. Eur. J.
, 2000 ,
6
, 2002 - 2010 .
Murdoch , P.D. ; Guo , Z.J. ; Parkinson , J.A. ; Sadler , P.J. ; Kinetics of formation and stability
of {Pt(dien)}
2+
complexes with octamer and 14-mer DNA oligonucleotides containing a
GG sequence;
J. Biol. Inorg. Chem.
, 1999 ,
4
, 32 - 38 .
Davis , M.S. ; Berners - Price , S.J. ; Hambley , T.W. ; Rates of platination of AG and GA con-
taining double-stranded oligonucleotides: insights into why cisplatin binds to GG and AG
but not GA sequences in DNA;
J. Am. Chem. Soc.
, 1998 ,
120
, 11380 - 11390 .
Dalbies , R. ; Payet , D. ; Leng , M. ; DNA double helix promotes a linkage isomerisation
reaction in trans- diamminedichloroplatinum(II) - modifi ed DNA;
Proc. Natl. Acad. Sci.
,
1994 ,
91
, 8147 - 8151 .
Hud , N.V. ; Polak , M. ; DNA-cation interactions: the major and minor grooves are fl exible
ionophores ;
Curr. Opin. Struct. Biol.
, 2001 ,
11
, 293 - 301 .
Chuprina , V.P. ; Lipanov , A.A. ; Fedoroff , O.Y. ; Kim , S - G. ; Kintanar , A. ; Reid , B.R. ; Sequence
effects on local DNA topology;
Proc. Natl. Acad. Sci.
, 1991 ,
88
, 9087 - 9091 .
Chuprina , V.P. ; Sletten , E. ; Fedoroff , O.Y. ; Investigation of solution structure of
d(GAATTTAATTC)2 by 1H NMR, molecular dynamics, mechanics, refi nement by back-
calculation of the NOESY spectrum and analysis of this structure using X- ray data ;
J. Biomol. Struct. Dyn.
, 1993 ,
10
, 693 - 707 .
Dickerson , R.F. ; Drew , H.R. ; Structure of a B-DNA dodecamer.II. Infl uence of base
sequence on helix structure.
J. Mol. Biol.
, 1981 ,
149
, 761 - 786 .
Burkhoff , A.M. ; Tullius , T.D. ; The unusual conformation adopted by the adenine tracts in
kinoplast DNA;
Cell
, 1987 ,
48
, 935 - 943 .
Alexeev , D.G. ; Lipanov , A.A. ; Skuratovskii , I.Y. ; Poly(dA) - poly(dT) is a B - type double
helix with distinctively narrow minor groove;
Nature
, 1987 ,
325
, 821 - 823 .
Tereshko , V. ; Minasov , G. ; Egli , M. ; A ' hydrated ' spIne in a B -DNA minor groove;
J. Am.
Chem. Soc.
, 1999 ,
121
, 3590 - 3595 .
Howerton , S.B. ; Sines , C.C. ; VanDerveer , D. ; Williams , L.D. ; Locating monovalent cations
in the groove of B- DNA ;
Biochemistry
, 2001 ,
40
, 10023 - 10031 .
Tereshko , V. ; Minasov , G. ; Egli , M. ; The Dickerson - Drew B - DNA dodecamer revisited at
atomic resolution;
J. Am. Chem. Soc.
, 1999 ,
121
, 470 - 471 .
Tereshko , V. ; Minasov , G. ; Egli , M. ; Atomic-resolution crystal structure of B- DNA reveal
specifi c infl uence of divalent metal ions on conformation and packing;
J. Mol. Biol.
, 1999 ,
291
, 83 - 99 .
Egli , M. ; DNA - cation interactions: Quo vadis?
Chem. Biol.
, 2002 ,
9
, 277 - 286 .
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