Chemistry Reference
In-Depth Information
chemical shift of a target nucleus (d target ) can be calculated using the following
equations: 90,91
δ
=−
σ
σ
(16.1)
target
ref
target
σ
=+
σ
DP
σ
(16.2)
target
σρ
D
(16.3)
σ P
∝∆
1
E
(16.4)
where s target = shielding constant of the target nucleus,
s ref = shielding constant of
the nucleus in the reference compound, r = electron density and
E = average
excitation energy of electronic transitions. For details, please refer to references 90
and 91 .
In the case of 15 N nuclei, their shielding constants include both s D and s P terms,
which is a very different situation from those of 1 H. More importantly, the s P term
generally has a larger effect on s target than the s D term. 90,91 Therefore, as a very rough
approximation, the s 15 N is proportional to the reciprocal of
E :
σσ
15
≈∝∆
P
1
E
(16.5)
15
N
N
E ) is highly correlated with the HOMO-
LUMO transition or the allowed transitions near the HOMO-LUMO transition,
since such transitions are the most frequently occurring transitions. This is the
reason why the average excitation energy,
This average excitation energy (
E , is highly correlated with the energy
of the HOMO-LUMO or related excitations.
For T - Hg II -T base pair formation, the reaction goes though the pathway shown
in Scheme 16.5 .
From the 15 N chemical shifts of N3, Hg II -bound N3 nuclei were resonated at a
lower - fi eld than proton-bound N3 nuclei. This means that s P of Hg II - bound N3
nuclei [s P (N - Hg II )] makes a larger contribution than s P of proton-bound N3 nuclei
[s P (N - H)] (Figure 16.6 ).
(
) >
(
)
σ
P
NHg
II
σ
P
NH
(16.6)
Caution must be taken with the sign of s P , since its sign is opposite to the sign of
s D . According to Equations (16.5) and (16.6), this phenomenon means that the
excitation energy of the electron around the Hg II - bound N3 nuclei [
E (N - Hg II )]
would be smaller than the proton-bound N3 nuclei [
E (N - H)] (Figure 16.6 ).
O
O
O
H +
Hg II
Hg II
N
NH
N
N
N
N
H +
Hg II
O
O
O
R
R
R
Scheme 16.5
 
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