Biology Reference
In-Depth Information
Fig. 14. Result of CSML to HTML Module. Circadian rhythms in Mus musculus model ( http://www.csml.org/models/
csml-models/circadian-rhythms-in-mouse/ ) converted to an HTML reporter format with the “CSML to HTML Module” and
loaded on a web browser. Entities and processes are arranged on the header with links to the detailed descriptions that contains
ID, name, simulation properties, biological properties and external URL links.
find better parameter sets for their models. The “Pathway Model to Multiple Program Language Export
Module” will be useful for the more advanced user who needs to connect the simulation model on CIO
4.0 to user's own application with source code level. The “CSMLDB Search Module” will be helpful for
the user who needs to create mammalian pathway models from scratch since more than 100,000 reliable
reactions are registered in CSMLDB. The websites [8,53] and the textbook [17] are useful for users who
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