Biology Reference
In-Depth Information
ICRISAT.
Sorghum chromosome
1
Physical distance (Mbp)
2
Linkage distance (cM)
3
Staygreen QTLs
StgA markers
Xtxp357
1
23.8
48.0
Xtxp43
1
50.3
65.8
Xtxp149
1
50.7
67.8
Xtxp88
1
50.7
67.7
Xtxp032
1
NA
77.1
Stg3 markers
Xtxp019
2
NA
80.0
Xtxp013
2
56.0
82.0
Xtxp298
2
57.1
92.9
XSbAGB03
2
58.1
97.7
89.9-104.4
4
Mesocarp thickness
NA
Xtxp001
2
61.4
126.0
Xtxp056.1
2
61.6
124.0
Xcup63
2
59.1
NA
Xgap084
2
NA
133.0
Xtxp286
2
NA
139.1
StgB markers
Xtxp100
2
69.6
166.1
Xtxp7
2
70.3
167.5
Xtxp207
2
70.3
167.5
Xtxp296
2
71.1
171.8
Xcup26
2
70.3
167.5
Xtxp8
2
NA
193.8
BI139914
2
71.8
NA
Stg2 markers
Xtxp033
3
51.4
61.3
Xgap236
3
52.3
62.8
Xtxp205
3
NA
68.1
Xtxp031
3
55.2
71.1
Xtxp183
3
NA
75.2
Xtxp336
3
55.4
73.2
87.9
4
R (pericarp color)
3
NA
Xtxp120(Cba)
3
57.3
88.4
Xtxp231
3
NA
101.1
Xtxp59
3
58.5
103.2
Between Stg1 and Stg2
Xtxp218
3
NA
110.9
Xtxp114
3
60.8
113.7
Stg1 markers
Xtxp285
3
67.8
136.6
Xtxp034
3
69.7
147.8
157.9-161.6
4
Awns: A/a
3
Stg4 markers
Xtxp15
5
42.0
64.2
Xtxp14
5
42.3
64.1
Xtxp299
5
NA
64.1
Xtxp225
5
NA
59.4
Xtxp23
5
54.5
75.9
1
Sorghum chromosome nomenclature as per Kim et al. (2005).
2
Physical map distance (in MbP) as estimated by BLAST search of primer pair sequence of individual SSR with sorghum
genome sequence as described in Ramu and Deshpande et al. (2010).
3
Linkage distance (in cM) of SSRs as estimated in consensus map developed by Mace et al. (2009).
4
Predicted linkage map position (putative interval in cM) of morphological markers as per Mace et al. (2010).
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