Biomedical Engineering Reference
In-Depth Information
TABLE 14.2 mRNA Codons and Resulting Protein Expressed
First
letter
Second letter
Third
letter
U
C
A
G
UUU
UCU
UAU
UGU
U
Phe
Tyr
Cys
UUC
UCC
UAC
UGC
C
U
Ser
UUA
UCA
UAA
Stop
UGA
Stop
A
Leu
UUG
UCG
UAG
Stop
UGG
Trp
G
CUU
CCU
CAU
CGU
U
His
CUC
CCC
CAC
CGC
C
C
Leu
Pro
Arg
CUA
CCA
CAA
CGA
A
Gin
CUG
CCG
CAG
CGG
G
AUU
ACU
AAU
AGU
U
Asn
Ser
AUC
Ile
ACC
AAC
AGC
C
A
Thr
AUA
ACA
AAA
AGA
A
Lys
Arg
AUG
Met
ACG
AAG
AGG
G
GUU
GCU
GAU
GGU
U
Asp
GUC
GCC
GAC
GGC
C
G
Val
Ala
Gly
GUA
GCA
GAA
GGA
A
Glu
GUA
GCA
GAA
GGA
G
does not alter the amino acid that it codes. To code for arginine, if first two bases are “C and
G” third base can be any one out of all the four RNA bases. In addition, both AGA and AGG
also code for arginine.
Missense mutationsd Exchange of one nucleotide base with another one results in
a codon that codes for a different amino acid. For example, in codon “CGU” (arginine),
exchanging cytosine with uracil (U) will result in codon UGU (cysteine).
Nonsense mutationsd One type of point mutation that usually has a profound effect
results in a nonsense or stop codon. For example, the codon “UGU,” exchanging the third
base “U” with an “A,” will result in a codon “UGA” that codes for a stop and can truncate
the protein molecule before completion. This results in the premature termination of trans-
lation and an incompletely formed protein.
14.1.2.3.2. INSERTIONS
Addition of one or more extra nucleotides or nucleotide pairs into the DNA of an organism
is called insertion. The insertion elements are usually about 700 e 1400 bp (base pairs) in
length; in Escherichia coli about five different insertion sequences are known and are present
on the chromosome. These elements can move on the chromosome from essentially any site
to another. Often they will insert in the middle of a gene, totally destroying its function.
Single base pair insertions usually occur due to errors in DNA replication or replication of
repeating sections of DNA (e.g. AT base pair repeats). Larger insertions involving long
sections of DNA are caused by transposable elements. Insertions in the coding region of
a gene (even a single base pair insertion) cause a shift in the reading frame (frameshift). Inser-
tions can also result in the altered splicing of the mRNA, because posttranscriptional splicing
of mRNA requires specific sequences of nucleotides. Both of these effects can alter the gene
product very significantly and are mostly deleterious.
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