Biomedical Engineering Reference
In-Depth Information
75. Dunker, A.K., Garner, E., Guilliot, S.
et al
. (1998) Protein disorder and the evolution of molecular
recognition: theory, predictions, and observations.
Pacific Symposium on Biocomputing '98
(eds
R.B. Altman, A.K. Dunker and T.E. Klein), World Scientific, pp. 473-484.
76. Chatr-aryamontri, A., Ceol, A., Palazzi, L.M.
et al
. (2007) MINT: the Molecular INTeraction
database.
Nucleic Acids Research
,
35
, D572-D574.
77. Gietz, R.D., Triggs-Raine, B., Robbins, A.
et al
. (1997) Identification of proteins that interact
with a protein of interest: applications of the yeast two-hybrid system.
Molecular and Cellular
Biochemistry
,
172
, 67-79.
78. Sprinzak, E., Sattath, S. and Margalit, H. (2003) How reliable are experimental protein-protein
interaction data?
Journal of Molecular Biology
,
327
, 919-923.
79. Chua, H.N. and Wong, L. (2008) Increasing the reliability of protein interactomes.
Drug Discovery
Today
,
13
, 652-658.
80. Schwikowski, B., Uetz, P. and Fields, S. (2000) A network of protein-protein interactions in
yeast.
Nature Biotechnology
,
18
, 1257-1261. This is the publication that first explored the use of
high-throughput protein-protein interactions for protein function prediction.
81. Hishigaki, H., Nakai, K.,Ono, T.
et al
. (2001) Assessment of prediction accuracy of protein
function from protein-protein interaction data.
Yea s t
,
18
, 523-531.
82. Vazquez, A., Flammini, A., Maritan, A. and Vespignani, A. (2003) Global protein function pre-
diction from protein-protein interaction networks.
Nature Biotechnology
,
21
, 697-700.
83. Chua, H.N., Sung, W.K. and Wong, L. (2007) Using indirect protein interactions for the prediction
of Gene Ontology functions.
BMC Bioinformatics
,
8
(Suppl. 4), S8. This is a recent review on
computational techniques to improve the reliability of experimentally derived protein-protein
interactions.
84. Gabow, A., Leach, S., Baumgartner, W.
et al
. (2008) Improving protein function prediction
methods with integrated literature data.
BMC Bioinformatics
,
9
, 198.
