Tufa-forming biofilms of German karstwater streams: microorganisms, exopolymers, hydrochemistry and calcification - Tufas and Speleothems: Unravelling the Microbial and Physical Controls - page 113

J ANSSEN , A., S WENNEN , R., P ODOOR ,N.&K EPPENS ,E.
1999. Biological and diagenetic influence in Recent
and fossil tufa deposits from Belgium. Sedimentary
Geology, 126, 75 - 95.
J OBB , G. 2008. TREEFINDER version of June 2008.
Munich, Germany. Distributed by the author at www.
treefinder.de.
J ONES ,D.&K EDDIE , R. M. 1992. The genus Arthrobac-
ter. In:B ALOWS , A., T R ¨ PER , H. G., D WORKIN , M.,
H ARDER ,W.&S CHLEIFER , K. H. (eds) The Pro-
karyotes.

stable isotopic compositions recorded in a laminated
tufa, SW Japan. Earth and Planetary Science Letters,
192, 31 - 44.
M ENZEL , H. 1909. Beitr¨ge zur Kenntnis der Quart¨rbil-
dungen im s¨ dlichen Hannover. 4. Das Kalktufflager
von Lauenstein. Jahrbuch der preußischen geolo-

gischen Landesanstalt 29(I), 604 - 609.
M ERZ -P REI ß, M. U. E. & R IDING , R. 1999. Cyanobacter-
ial tufa calcification in two freshwater streams: ambi-
ent environment, chemical thresholds and biological
processes. Sedimentary Geology, 126, 103 - 124.
M EYER ,R.&S CHMIDT -K ALER , H. 1983. Erdgeschichte
sichtbar gemacht. Ein geologischer F¨ hrer durch die
Altm¨ hlalb.

2nd edn. Springer Verlag, New York,

1283 - 1299.
K ANN , E. 1973. Bemerkungen zur Systematik und ¨ kolo-
gie einiger mit Kalk inkrustierter Phormidiumarten.
Schweizerische

Bayerisches Geologisches Landesamt,

Zeitschrift f ¨r Hydrologie, 35, M¨ nchen.

M ONTY , C. L. V. 1976. The origin and development of
crytalgal fabrics. Developments in Sedimentology, 20,
193 - 249.
M ORAN , A. L. 2000. Calcein as a marker in experimental
studies newly-hatched gastropods. Marine Biology,
137, 893 - 898.
M UURHOLM , S., C OUSIN , S., P ¨ UKER , O., B RAMBILLA ,
E. & S TACKEBRANDT , E. 2007. Pedobacter duraquae
sp. nov., Pedobacter westerhofensis sp. nov., Pedobac-
ter metabolipauper sp. nov., Pedobacter hartonius sp.
nov. Pedobacter steynii sp. nov., isolated from a hard-
water rivulet. International Journal of Systematic and
Evolutionary Microbiology, 57, 2221 - 2227.
N EU , T. R., S WERHONE ,G.D.W.&L AWRENCE ,J.R.
2001. Assessment of lectin-binding analysis for in
situ detection of glycoconjugates in biofilm systems.
Microbiology, 147, 299 - 313.
N EU , T. R., W OELFL ,S.&L AWRENCE , J. R. 2004. Three-
dimensional differentiotation of photo-autotrophic
biofilm constituents by multi-channel laser scanning
microscopy

141 - 151.
K ANO , A., M ATSUOKA , J., K OJO ,T.&F UJII , H. 2003.
Origin of annual laminations in tufa deposits, south-
west Japan. Palaeogeography, Palaeoclimatology,

Palaeoecology, 191, 243 - 262.
K ANO , A., K AWAI , T., M ATSUOKA ,J.&I HARA , T. 2004.
High-resolution records of rainfall events from clay
bands in tufa. Geology, 32, 793 - 796.
K AWAGUCHI ,T.&D ECHO , A. W. 2002. Isolation and
biochemical characterization of extracellular poly-
meric secreations (EPS) from modern marine stroma-
tolites and its inhibitory effect on CaCO 3
precipitation. Preparative Biochemistry Biotechnol-
ogy, 32, 51 - 63.
K AWAI , T., K ANO , A., M ATSUOKA ,J.&I HARA , T. 2006.
Seasonal variation in water chemistry and depositional
processes in a tufa-bearing stream in SW-Japan, based
on 5 years of monthly observations. Chemical

Geology, 232, 33 - 53.
K L ¨ HN , H. 1923. Die Petrogenese der Kalktuffe nebst
einigen sich daraus ergebenden geologischen Proble-
men. Geologisches Archiv, 2, 298 - 316.
K NOLL , A. H., F AIRCHILD ,I.J.&S WETT , K. 1993. Cal-
cified microbes in Neoproterozoic carbonates: Impli-
cations for our understanding of the Proterozoic/
Cambrian Transition. Palaios, 8, 512 - 525.
K OM ´ REK ,J.&A NAGNOSTIDIS , K. 2005. Cyanoprokar-
yota, part 2. Oscillatoriales. In:B ¨ DEL , B., G ¨ RTNER ,
G., K RIENITZ , L. &S CHAGERL , M. (eds)
S¨ ßwasserflora von Mitteleuropa Band 19/2. Gustav
Fischer, Jena, 1 - 759.
L A T OUCHE , T. H. D. 1913. Geology of the Northern Shan
States. Memoirs of the Geological Survey of India,
39(2), 1 - 397.
L IU , Z., S VENSSON , U., D REYBRODT , W., Y UAN ,D.&
B UHMANN , D. 1995. Hydrodynamic control of inor-
ganic calcite precipitation in Huanglong Ravine,
China: Field measurements and theoretical prediction
of

(single-photon and two-photon exci-

tation). Journal of Microbiological Methods, 56,

161 - 172.
N G , C. C., H UANG , W. C., C HANG , C. C., T ZENG , W. S.,
C HEN , T. W., L IU ,Y.S.&S HYU , Y. T. 2006. Tufa
microbial diversity revealed by 16S rRNA cloning in
Taroko National Park, Taiwan. Soil Biology & Bio-
chemistry, 38, 342 - 348.
P ACE , N. R. 1997. A molecular view of microbial diversity
and the biosphere. Science, 276, 734 - 740.
P ALINSKA ,K.A.&M ARQUARDT , J. 2008. Genotypic
and phenotypic analysis of strains assigned to the wide-
spread cyanobacterial morphospecies Phormidium
autumnale (Oscillatoriales). Archives of Microbiology,
189, 325 - 335.
P ARKHURST ,D.L.&A PPELO , C. A. J. 1999. User's guide
to PHREEQC (version 2) - a computer program
for speciation, batch-reaction, one-dimensional trans-
port, and inverse geochemical calculations. Water-
Resources Investigations Report, 99-4259, 1 - 312.
U.S. Geological Survey, Denver.
P EDLEY , H. M. 2000. Ambient temperature freshwater
microbial tufas. In:R IDING ,R.E.&A WRAMIK ,S.
M.

deposition rates. Geochimica et Cosmochimica

Acta, 59, 3087 - 3097.
L OWENSTEIN , T. K., T IMOFEEFF , M. N., B RENNAN ,
S. T., H ARDIE ,L.A.&D EMICCO , R. V. 2001. Oscil-
lations in Phanerozoic seawater chemistry: evidence
from fluid inclusions. Science, 294, 1086 - 1088.
L UDWIG , W., S TRUNK ,O. ET AL . 2004. ARB: a software
environment

(eds) Microbial Sediments. Springer, Berlin,

179 - 186.
P ENTECOST , A. 1978. Blue - green algae and fresh-
water carbonate deposits. Proceedings of the Royal
Society of London, Series B (Biological Sciences),
200, 43 - 61.

for sequence data. Nucleic Acids

Research, 32, 1363 - 1371.
M ATSUOKA , J., K ANO , A., O BA , T., W ATANABE , T.,
S AKAI ,S.&S ETO , K. 2001. Seasonal variation of