Biology Reference
In-Depth Information
measured based on differences between growth patterns is
defined as:
2
K
-
1
å
K
å
æ
GM
ij
(
X
1
,
X
2
)
GM
ij
(
M
1
,
M
2
)
-
1
ö
ç
÷
D
G
(
X
,
M
)
=
è
ø
i
=
1
j
=
i
+
1
The dissimilarity measures provided above are only a sample of possi-
ble dissimilarity measures that may be used in classification.
Description of the classification rule
All of the dissimilarity measures given above can be used in devising
a classification rule. The steps of the procedure are the same regard-
less of which measure is used. Suppose, for example, we choose the
Procrustes distance to use as the dissimilarity measure. Then, the
steps are as follows:
STEP 1: Collect samples from each of the classes that are of
interest. Estimate the mean form matrix and the variance-
covariance matrix for each sample using these data. Let
M
1
and denote the estimated mean form and the variance
covariance matrix for the first sample. Do this for the samples
representing each class.
(
ˆ
S
K
)
STEP 2: Given a new individual represented by a landmark
coordinate matrix, calculate the Procrustes distance between
the individual and each of the classes.
STEP 3: Classify the new individual into that class that it
resembles the most; i.e., the smallest Procrustes distance.
In the next section, we compare the performance of the dissimilar-
ity measures described earlier using data from individuals diagnosed
with differing craniofacial malformations.
6.4 A classification example
As discussed in
Chapter 1
, the developing neurocranium is made up of
a number of roughly shell-shaped bony plates that align with one
another at joints or articulations called sutures. The typical shape of
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