Biology Reference
In-Depth Information
measured based on differences between growth patterns is
defined as:
2
K - 1
å
K
å
æ
GM ij ( X 1 , X 2 )
GM ij ( M 1 , M 2 ) - 1
ö
ç
÷
D G ( X , M ) =
è
ø
i = 1
j = i + 1
The dissimilarity measures provided above are only a sample of possi-
ble dissimilarity measures that may be used in classification.
Description of the classification rule
All of the dissimilarity measures given above can be used in devising
a classification rule. The steps of the procedure are the same regard-
less of which measure is used. Suppose, for example, we choose the
Procrustes distance to use as the dissimilarity measure. Then, the
steps are as follows:
STEP 1: Collect samples from each of the classes that are of
interest. Estimate the mean form matrix and the variance-
covariance matrix for each sample using these data. Let M 1
and denote the estimated mean form and the variance
covariance matrix for the first sample. Do this for the samples
representing each class.
( ˆ
S K )
STEP 2: Given a new individual represented by a landmark
coordinate matrix, calculate the Procrustes distance between
the individual and each of the classes.
STEP 3: Classify the new individual into that class that it
resembles the most; i.e., the smallest Procrustes distance.
In the next section, we compare the performance of the dissimilar-
ity measures described earlier using data from individuals diagnosed
with differing craniofacial malformations.
6.4 A classification example
As discussed in Chapter 1 , the developing neurocranium is made up of
a number of roughly shell-shaped bony plates that align with one
another at joints or articulations called sutures. The typical shape of
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