RNA Processing in C. elegans - Caenorhabditis Elegans: Molecular Genetics and Development - page 212

MacMorris, M., Kumar, M., Lasda, E., Larsen, A., Kraemer, B., and Blumenthal, T. (2007). A novel
family of C. elegans snRNPs contains proteins associated with trans-splicing. RNA 13 , 511-520.
Mandel, C. R., Bai, Y., and Tong, L. (2008). Protein factors in pre-mRNA 3 0 -end processing. Cell Mol. Life
Sci. 65 , 1099-1122.
Mandel, C. R., Kaneko, S., Zhang, H., Gebauer, D., Vethantham, V., Manley, J. L., and Tong, L. (2006).
Polyadenylation factor CPSF-73 is the pre-mRNA 3 0 -end-processing endonuclease. Nature 444 ,
953-956.
Maroney, P. A., Hannon, G. J., Denker, J. A., and Nilsen, T. W. (1990). The nematode spliced leader RNA
participates in trans-splicing as an Sm snRNP. EMBO J. 9 , 3667-3673.
Maroney, P. A., Hannon, G. J., Shambaugh, J. D., and Nilsen, T. W. (1991). Intramolecular base pairing
between the nematode spliced leader and its 5 0 splice site is not essential for trans-splicing in vitro.
EMBO J. 10 , 3869-3875.
Maroney, P. A., Romfo, C. M., and Nilsen, T. W. (2000). Functional recognition of 5 0 splice site by U4/U6.
U5 tri-snRNP defines a novel ATP-dependent step in early spliceosome assembly. Mol. Cell 6 ,
317-328.
Maroney, P. A., Yu, Y. T., Jankowska, M., and Nilsen, T. W. (1996). Direct analysis of nematode cis- and
trans-spliceosomes: A functional role for U5 snRNA in spliced leader addition trans-splicing and the
identification of novel Sm snRNPs. RNA 2 , 735-745.
de la Mata, M., and Kornblihtt, A. R. (2006). RNA polymerase II C-terminal domain mediates regulation
of alternative splicing by SRp20. Nat. Struct. Mol. Biol. 13 , 973-980.
Mazroui, R., Puoti, A., and Kramer, A. (1999). Splicing factor SF1 from Drosophila and Caenorhabditis:
Presence of an N-terminal RS domain and requirement for viability. RNA 5 , 1615-1631.
McCarthy, J. E., and Gualerzi, C. (1990). Translational control of prokaryotic gene expression. Trends
Genet. 6 , 78-85.
McCracken, S., Fong, N., Yankulov, K., Ballantyne, S., Pan, G., Greenblatt, J., Patterson, S. D., Wickens,
M., and Bentley, D. L. (1997). The C-terminal domain of RNA polymerase II couples mRNA processing
to transcription. Nature 385 , 357-361.
Merendino, L., Guth, S., Bilbao, D., Martınez, C., and Valcarcel, J. (1999). Inhibition of msl-2 splicing by
sex-lethal reveals interaction between U2AF35 and the 3 0 splice site AG. Nature 402 , 838-841.
Miguel-Aliaga, I., Culetto, E., Walker, D. S., Baylis, H. A., Sattelle, D. B., and Davies, K. E. (1999). The
Caenorhabditis elegans orthologue of the human gene responsible for spinal muscular atrophy is a
maternal product critical for germline maturation and embryonic viability. Hum. Mol. Genet. 8 ,
2133-2143.
Morton, J. J., and Blumenthal, T. (2011). Identification of transcriptional start sites of trans-spliced genes:
Uncovering unusual operon arrangements. RNA 17 , 327-337.
Muhich, M. L., and Boothroyd, J. C. (1988). Polycistronic transcripts in trypanosomes and their accu-
mulation during heat shock: Evidence for a precursor role in mRNA synthesis. Mol. Cell Biol. 8 ,
3837-3846.
Nilsen, T. W. (1994). Unusual strategies of gene expression and control in parasites. Science 264 ,
1868-1869.
Ogg, S. C., Anderson, P., and Wickens, M. P. (1990). Splicing of a C. elegans myosin pre-mRNA in a
human nuclear extract. Nucleic Acids Res. 18 , 143-149.
Osbourn, A. E., and Field, B. (2009). Operons. Cell Mol. Life Sci. 66 , 3755-3775.
Park, Y. S., and Kramer, J. M. (1990). Tandemly duplicated Caenorhabditis elegans collagen genes differ
in their modes of splicing. J. Mol. Biol. 211 , 395-406.
Patel, S. B., and Bellini, M. (2008). The assembly of a spliceosomal small nuclear ribonucleoprotein
particle. Nucleic Acids Res. 36 , 6482-6493.
Pettitt, J., Muller, B., Stansfield, I., and Connolly, B. (2008). Spliced leader trans-splicing in the nematode
Trichinella spiralis uses highly polymorphic, noncanonical spliced leaders. RNA 14 , 760-770.
Pouchkina-Stantcheva, N. N., and Tunnacliffe, A. (2005). Spliced leader RNA-mediated trans-splicing in
phylum Rotifera. Mol. Biol. Evol. 22 , 1482-1489.