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References
Aalberse, R. C., and van Ree, R. (1996) Cross-reactive carbohydrate determinants. Monogr.
Allergy 32:78-83.
Aalberse, R. C. (2000) Structural biology of allergens. J. Allergy Clin. Immunol. 106:228-238.
Altschul, S. F., Gish, W., Miller, W., Myers, E.W., and Lipman, D.J. (1990) Basic local
alignment search tool. J. Mol. Biol. 215:403-410.
Bailey, T. L., and Elkan, C. (1994) Fitting a mixture model by expectation maximization to
discover motifs in biopolymers. Proc. Int. Conf. Intell. Syst. Mol. Biol. 2:28-36.
Bateman, A., Coin, L., Durbin, R., Finn, R.D., Hollich, V., Griffiths-Jones, S., Khanna, A.,
Marshall, M., Moxon, S., Sonnhammer, E.L., Studholme, D.J., Yeats, C., and Eddy,
S.R. (2004) The Pfam protein families database. Nucleic Acids Res. 32:
D138-D141.
Benson, D. A., Karsch-Mizrachi, I., et al. (2003) GenBank. Nucleic Acids Res. 31:23-27.
Bourne, P. E., Addess, K. J., Bluhm, W.F., Chen, L., Deshpande, N., Feng, Z., Fleri, W.,
Green, R., Merino-Ott, J.C., Townsend-Merino, W., Weissig, H., Westbrook, J., and
Berman, H.M. (2004) The distribution and query systems of the RCSB Protein Data Bank.
Nucleic Acids Res. 32:D223-D225.
Brusic, V., Millot, M., Petrovsky, N., Gendel, S.M., Gigonzac, O., and Stelman, S.J. (2003)
Allergen databases. Allergy 58:1093-1100.
Cantani, A. (1999) Hidden presence of cow's milk proteins in foods. J. Invest. Allergol. Clin.
Immunol. 9:141-145.
FAO/WHO (2001) Allergenicity of Genetically Modified Foods. Food and Agriculture
Organization of the United Nations, Rome, Italy, http://www.who.int/foodsafety/
publications/biotech/ec_jan2001/en/.
FAO/WHO (2003) Codex Principles and Guidelines on Foods Derived from Biotechnology.
Food and Agriculture Organization of the United Nations, Rome, Italy, http://www.
codexalimentarius .net web/more_info.jsp?id_sta=10007.
Fiers, M. W., Kleter, G.A., Nijland, Peijnenburg, Nap, and van Ham (2004) Allermatch, a
webtool for the prediction of potential allergenicity according to current FAO/WHO
Codex alimentarius guidelines. BMC Bioinformatics 5:133.
Gendel, S. M. (1998) Sequence databases for assessing the potential allergenicity of proteins
used in transgenic foods. Adv. Food Nutr. Res. 42:63-92.
Hileman, R. E., Silvanovich, A., Goodman, R.E., Rice, E.A., Holleschak, G., Astwood, J.D.,
and Hefle, S.L. (2002) Bioinformatic methods for allergenicity assessment using a
comprehensive allergen database. Int. Arch. Allergy Immunol. 128:280-291.
Ichikawa, K., Vailes, L. D., Pomes, A., and Chapman, M.D. (2001) Identification of a novel
cat allergen─cystatin. Int. Arch. Allergy Immunol. 124:55-56.
Ivanciuc, O., Schein, C. H., and Braun, W. (2003) SDAP: Database and computational tools
for allergenic proteins. Nucleic Acids Res. 31:359-362.
Iyer, L. M., Koonin, E. V., and Aravind, L. (2001) Adaptations of the helix-grip fold for
ligand binding and catalysis in the START domain superfamily. Proteins 43:134-144.
Izumi, H., Sugiyama, M., Matsuda, T., and Nakamura, R. (1999) Structural characterization of the
16-kDa allergen, RA17, in rice seeds. Prediction of the secondary structure and identification of
intramolecular disulfide bridges. Biosci. Biotechnol. Biochem. 63:2059-2063.
Jansen, J. J., Kardinaal, A. F., Huijbers, G., Vlieg-Boerstra, B.J., Martens, B.P., and
Ockhuizen, T. (1994) Prevalence of food allergy and intolerance in the adult Dutch
population. J. Allergy Clin. Immunol. 93:446-456.
Kanny, G., Moneret-Vautrin, D. A., Flabbee, J., Beaudouin, E., Morisset, M., and Thevenin, F.
(2001) Population study of food allergy in France. J. Allergy Clin. Immunol. 108:
133-140.
