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The design of a disturbance observer based on the Derivative-free nonlinear
Kalman Filter enables simultaneous estimation of the nonmeasurable elements of
the state vector, that is y 2 , y 3 and y 5 , y 6 and estimation of the disturbance term
d 1 D z 7 and d 2 D z 10 . For the compensation of the disturbance term the control
input that is applied to the circadian oscillator model is modified as follows:
v 1 .k/ D v .k/ d 1 .k/ or
v 1 .k/ D v .k/ z 7 .k/
(5.87)
v 2 .k/ D v .k/ d 2 .k/ or
v 2 .k/ D v .k/ z 10 .k/
In the design of the associated disturbances' estimator one has the dynamics defined
in Eq. ( 5.85 ), where K2R 121 is the state estimator's gain and matrices A o , B o , and
C o have been given in Eqs. ( 5.84 )-( 5.86 ). The discrete-time equivalents of matrices
A o , B o , and C o are denoted as A d , B d , and C d respectively, and are computed
with the use of common discretization methods. Next, a Derivative-free nonlinear
Kalman Filter can be designed for the aforementioned representation of the system
dynamics [ 157 , 158 ]. The associated Kalman Filter-based disturbance estimator is
given by the recursion [ 166 , 169 ]
Measurement update :
K.k/ D P .k/ C d ΠC d P .k/ C d C R 1
z .k/ D z .k/ C K.k/ΠC d z .k/ C d z .k/
P.k/D P .k/ K.k/ C d P .k/
(5.88)
Time update :
A d .k/P.k/ A d .k/ C Q.k/
P .k C 1/ D
(5.89)
A d .k/ z .k/ C B d .k/ v .k/
z .k C 1/ D
5.8
Simulation Tests
The nonlinear dynamical model of the coupled circadian oscillators has been
described in Eqs. ( 5.51 )-( 5.56 ). Using the canonical form model control law for the
FRQ protein synthesis was computed according to the stages described in Sect. 5.6 .
The Derivative-free nonlinear Kalman Filter used for model uncertainty, measure-
ment noise, and external disturbances compensation was designed according to
Sect. 5.7 .
Results on the synchronization between a primary and a secondary circadian cell
are provided for six different cases, each one associated with different disturbance
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