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hury. Network component analysis: reconstruction of regulatory signals in biological
systems.
Proc Natl Acad Sci U S A
, 100(26):15522-7, 2003.
[56] J.Lim,T.Hao,C.Shaw,A.J.Patel,G.Szabo,J.F.Rual,C.J.Fisk,N.Li,A.Smolyar,
D. E. Hill, A. L. Barabasi, M. Vidal, and H. Y. Zoghbi. A protein-protein interaction
network for human inherited ataxias and disorders of purkinje cell degeneration.
Cell
,
125(4):801-14, 2006.
[57]
J. Locker, D. Ghosh, P. V. Luc, and J. Zheng. Definition and prediction of the full
range of transcription factor binding sites-the hepatocyte nuclear factor 1 dimeric
site.
Nucleic Acids Res
, 30(17):3809-17, 2002.
[58]
N. M. Luscombe, M. M. Babu, H. Yu, M. Snyder, S. A. Teichmann, and M. Gerstein.
Genomic analysis of regulatory network dynamics reveals large topological changes.
Nature
, 431(7006):308-12, 2004.
[59]
A. M. McGuire and G. M. Church. Predicting regulons and their cis-regulatory motifs
by comparative genomics.
Nucleic Acids Res
, 28(22):4523-30, 2000.
[60]
M. C. Monti, A. Casapullo, R. Riccio, and L. Gomez-Paloma. Further insights on
the structural aspects of pla(2) inhibition by gamma-hydroxybutenolide-containing
natural products: a comparative study on petrosaspongiolides m-r.
Bioorg Med Chem
,
12(6):1467-74, 2004.
[61]
E. A. Nelson, S. R. Walker, J. V. Alvarez, and D. A. Frank. Isolation of unique stat5
targets by chromatin immunoprecipitation-based gene identification.
JBiolChem
,
279(52):54724-30, 2004.
[62]
A. Ng, B. Bursteinas, Q. Gao, E. Mollison, and M. Zvelebil. pstiing: a 'systems'
approach towards integrating signalling pathways, interaction and transcriptional
regulatory networks in inflammation and cancer.
Nucleic Acids Res
, 34(Database
issue):D527-34, 2006.
[63]
A. Nikitin, S. Egorov, N. Daraselia, and I. Mazo. Pathway studio-the analysis and
navigation of molecular networks.
Bioinformatics
, 19(16):2155-7, 2003.
[64]
P. Patel, E. Keogh, J. Lin, and S. Lonardi. Mining motifs in massive time series
databases.
ICDM 2002
, pages 370-377, 2002.
[65]
J. Pradines, L. Rudolph-Owen, J. Hunter, P. Leroy, M. Cary, R. Coopersmith, V. Dan-
cik, Y. Eltsefon, V. Farutin, C. Leroy, J. Rees, D. Rose, S. Rowley, A. Ruttenberg,
P. Wieghardt, C. Sander, and C. Reich. Detection of activity centers in cellular path-
ways using transcript profiling.
J Biopharm Stat
, 14(3):701-21, 2004.
[66]
D. N. Rassokhin and D. K. Agrafiotis. Kolmogorov-smirnov statistic and its applica-
tion in library design.
J Mol Graph Model
, 18(4-5):368-82, 2000.
[67]
E. Ravasz, A. L. Somera, D. A. Mongru, Z. N. Oltvai, and A. L. Barabasi. Hierarchi-
cal organization of modularity in metabolic networks.
Science
, 297(5586):1551-5,
2002.
[68]
A. W. Rives and T. Galitski. Modular organization of cellular networks.
Proc Natl
Acad Sci U S A
, 100(3):1128-33, 2003.
[69]
P. Ruminy, C. Gangneux, S. Claeyssens, M. Scotte, M. Daveau, and J. P. Salier. Gene
transcription in hepatocytes during the acute phase of a systemic inflammation: from
transcription factors to target genes.
Inflamm Res
, 50(8):383-90, 2001.
[70]
A. Sandelin, W. W. Wasserman, and B. Lenhard. Consite: web-based prediction
of regulatory elements using cross-species comparison.
Nucleic Acids Res
, 32(Web
Server issue):W249-52, 2004.
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