Agriculture Reference
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be limited to traits controlled by fewer QTLs and
to the likelihood of identifying genotypes contain-
ing all or most QTLs in smaller populations com-
monly used by breeders (Bonnett et al., 2005).
Enrichment strategies may aid in overcoming
large numbers of QTLs in biparental- and back-
cross-based breeding programs.
Marker-assisted selection is likely to provide
the greatest benefi t to breeders targeting novel
traits from distantly related germplasm. For
example, markers are extremely useful in identi-
fying recombinants when targeting positive genes
linked in repulsion to genes of negative effect.
Several QTLs have been identifi ed with potential
for selection of improved performance in water-
limited environments (Table 11.2). Some of these
refl ect major genes with known effects on
improved root growth (e.g., saline tolerance or
root disease resistance) to increase water use,
while the functional basis of others is not well
understood (e.g., Kirigwi et al., 2007).
Critical to successful implementation of linked
markers in breeding are well-defi ned QTLs for
improved productivity. Experimental popula-
tions under evaluation should be representative of
the target populations under selection. Genotyp-
ing should be adequate in development toward a
good molecular map with even marker coverage
and quality mapping (good markers and map
development); phenotyping should be sound and
Table 11.2 Traits with potential for improving wheat performance in water-limited environments. Details are also provided
on genetic control for each trait.
Ease of
Screening
Chromosomal Location of
Genes
Trait
Heritability
Source
Root health
Aluminum tolerance
Simple
High
4D
Delhaize et al. (2004)
Boron tolerance
Diffi cult
High
7B, 7D
Jefferies et al. (2000)
Cereal cyst nematode
Diffi cult
Low
2B, 2D
Lagudah et al. (1997)
Salt stress
Sodium exclusion
Simple
High
2A, 4D
Huang et al. (2006)
Sodium tolerance
Diffi cult
High
5A
Byrt et al. (2007)
Drought stress
Phenology
Simple
High
2A, 2B, 2D, 3A, 3B, 5A, 5B,
5D, 6A, 6B, 7A, 7B
Snape et al. (2001)
Osmotic adjustment
Diffi cult
Moderate
7A
Morgan and Tan (1996)
Carbon isotope disc. (leaf)
Diffi cult
High
1B, 1D, 2D, 3B, 4A, 4B, 4D,
5A, 7A, 7B
Rebetzke et al. (2008b)
Carbon isotope disc. (grain)
Diffi cult
High
1D, 2A, 2D, 4B, 4D, 6D, 7B
Rebetzke et al. (2008b)
Canopy temperature
Simple
Moderate
1B, 2B, 3B, 4A
Pinto et al. (2008)
Stem carbohydrates
Diffi cult
Moderate
1A, 2B, 2D, 3B, 4B, 5B, 6B,
7A, 7B
Rebetzke et al. (2008a)
Stomatal conductance
Diffi cult
Low
1B, 2A, 2B, 2D, 4A, 4B, 4D,
7A, 7B
G.J. Rebetzke, unpublished data
Glaucousness
Simple
Moderate
2B, 2D
Tsunewaki and Ebana (1999)
Staygreen
Diffi cult
Moderate
2B, 2D
Verma et al. (2004)
Leaf rolling
Simple
High
Unknown
Sirault et al. (2008)
Early vigor
Simple
High
2D, 4B, 4D, 5A
Rebetzke et al. (2001a)
Coleoptile length
Simple
Moderate
2B, 2D, 4A, 4B, 4D, 5D, 6B
Rebetzke et al. (2007b)
Harvest index
Diffi cult
High
2B, 2D, 4B, 4D
Ellis et al. (2002)
Photosynthetic capacity a
Simple
Moderate
1B, 1D, 2D, 3B, 4A, 4B, 4D,
5B, 6B, 7A, 7B
G.J. Rebetzke, unpublished data
Restricted-tillering
Simple
High
1A
Spielmeyer and Richards (2004)
Rate-of-grain-fi lling
Diffi cult
Uncertain
Unknown
Whan et al. (1996)
Root biomass
Diffi cult
Low
1B
Waines and Ehdaie (2007)
a Surrogates for photosynthetic capacity (SPAD, SLW, SLN, leaf N content).
 
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