Biology Reference
In-Depth Information
catalytic mechanism in early mammalian protein C. Such an approach lends itself
readily to the study of the common ancestors of other multigene families and may
therefore allow further 'structure-function studies' of phylogenetically recon-
structed proteins to be performed.
References
Arni R.K., Padmanabhan K., Padmanabhan K.P., Wu T.P., Tulinsky A. (1993) Structures of the
non-covalent complexes of human and bovine prothrombin fragment 2 with human PPACK-
thrombin. Biochemistry 32 : 4727-4737.
Audic S., Beraud-Colomb E. (1997) Ancient DNA is thirteen years old. Nature Biotechnol . 15 :
855-858.
Austin J.J., Ross A.J., Smith A.B., Fortey R.A., Thomas R.H. (1997) Problems of reproducibility -
does geologically ancient DNA survive in amber-preserved insects? Proc. Roy. Soc. Lond. Series B:
Biological Sciences 264 : 467-474.
Banfield D.K., MacGillivray R.T.A. (1992) Partial characterization of vertebrate prothrombin
cDNAs: amplification and sequence analysis of the B chain of thrombin from nine different
species. Proc. Natl. Acad. Sci. USA 89 : 2779-2783.
Bird A.P. (1995) Gene number, noise reduction and biological complexity. Trends Genet . 11 : 94-100.
Blake C.C.F., Harlos K., Holland S.K. (1987) Exon and domain evolution in the proenzymes of
blood coagulation and fibrinolysis. Cold Spring Harb. Symp. Quant. Biol . 52 : 925-931.
Britten R.J. (1986) Rates of DNA sequence evolution differ between taxonomic groups. Science 231 :
1393-1398.
Chandrasekharan U.M., Sanker S., Glynias M.J., Karnik S.S., Husain A. (1996) Angiotensin II-
forming activity in a reconstructed ancestral chymase. Science 271 : 502-505.
Collins D.W., Jukes T.H. (1994) Rates of transition and transversion in coding sequences since the
human-rodent divergence. Genomics 20 : 386-396.
Creighton T.E., Darby N.J. (1989) Functional evolutionary divergence of proteolytic enzymes and
their inhibitors. Trends Biochem. Sci . 14 : 319-324.
DeSalle R., Gatesy J., Wheeler W., Grimaldi D. (1992) DNA sequences from a fossil termite in
Oligo-Miocene amber and their phylogenetic implications. Science 257 : 1933-1936.
Doolittle R.F., Feng D.F. (1987) Reconstructing the evolution of vertebrate blood coagulation from a
consideration of the amino acid sequences of clotting proteins. Cold Spring Harb. Symp. Quant.
Biol . 52 : 869-874.
Doolittle R.F. (1993) The evolution of vertebrate blood coagulation: a case of Yin and Yan. Thromb.
Haemost . 70 : 24-28.
Esmon C.T. (1987) The regulation of natural anticoagulant pathways. Science 235 : 1348-1352.
Esmon C.T. (1995) Thrombomodulin as a model of molecular mechanisms that modulate protease
specificity and function at the vessel surface. FASEB J . 9 : 946-955.
Friedrich M., Tautz D. (1995) Ribosomal DNA phylogeny of the major extant arthropod classes and
the evolution of myriapods. Nature 376 : 165-167.
Gojobori T., Ikeo K. (1994) Molecular evolution of serine protease and its inhibitor with special
reference to domain evolution. Phil. Trans. R. Soc. Lond. B 344 : 411-415.
Greengard J.S., Fisjer C.L., Villoutreix B., Griffin J.H. (1994) Structural basis for type I and type II
deficiencies of thrombotic plasma protein C: patterns revealed by three dimensional molecular
modeling of mutations of the protease domain. Proteins Struct. Funct. Genet . 18 : 367-380.
Greer J. (1990) Comparative modeling methods: application to the family of the mammalian serine
proteases. Proteins Struct. Funct. Genet. 7 : 317-334.
Grinnell B.W., Gerlitz B., Berg D.T. (1994) Identification of a region in protein C involved in
thrombomodulin-stimulated activation by thrombin: potential repulsion at anion-binding site I
in thrombin. Biochem. J . 303 : 929-933.
Hill R.E., Hastie N.D. (1987) Accelerated evolution in the reactive centre regions of serine protease
inhibitors. Nature 326 : 96-99.
Hillis D.M., Allard M.W., Miyamoto M.M. (1993) Analysis of DNA sequence data: phylogenetic
inference. Meths. Enzymol . 224 : 456-187.
Search WWH ::




Custom Search